Resource

Id Histone_ChIP-seq/ENCSR620TXLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR620TXL [biosample_summary="Homo sapiens adrenal gland tissue male adult (37 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR620TXL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue male adult (37 years)
  • date_created: 2016-03-19T00:37:50.868938+00:00
  • date_released: 2016-08-09
  • doi: 10.17989/ENCSR620TXL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR620TXL float

Histone_ChIP-seq_ENCSR620TXL
Histone_ChIP-seq ENCSR620TXL [biosample_summary="Homo sapiens adrenal gland tissue male adult (37 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR620TXL [1.88, 12.4]
n
10,768,432
mean
5.64
sd
1.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 107684320.33% 15631
chr1 1089694 0.44% 1569
chr2 788180 0.33% 1100
chr3 636981 0.32% 909
chr4 445235 0.23% 627
chr5 544129 0.30% 748
chr6 646555 0.38% 873
chr7 520073 0.33% 776
chr8 407055 0.28% 592
chr9 448604 0.32% 644
chr10 472982 0.35% 674
chr11 586655 0.43% 869
chr12 606833 0.46% 850
chr13 220804 0.19% 318
chr14 365354 0.34% 529
chr15 359650 0.35% 500
chr16 427232 0.47% 649
chr17 591841 0.71% 895
chr18 188070 0.23% 277
chr19 691626 1.18% 1056
chr20 264250 0.41% 375
chr21 95453 0.20% 142
chr22 213127 0.42% 327
chrX 150408 0.10% 318
chrY 7641 0.01% 14
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 15631 190 4892 688.92 603
global segment-length histogram

Files

Filename Size md5
ENCFF782ECF.bed.gz 333.63 KB 67fcf2f4e4b8f0f7654d922d10f25e8d
ENCFF782ECF.tabix.bed.gz 164.17 KB 7cd332ced10893e3234a553e762ec197
ENCFF782ECF.tabix.bed.gz.tbi 100.24 KB 23febffc5bebdba2acdd3f3e07f580aa
genomic_resource.yaml 1.72 KB e43ccdd0defa49bfbffaf907a32ab11f
statistics/