Resource

Id Histone_ChIP-seq/ENCSR619EZGcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR619EZG [biosample_summary="Homo sapiens testis tissue male adult (54 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR619EZG
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000473/
  • biosample_summary: Homo sapiens testis tissue male adult (54 years)
  • date_created: 2017-12-06T21:08:47.258148+00:00
  • date_released: 2019-02-12
  • doi: 10.17989/ENCSR619EZG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR619EZG float

Histone_ChIP-seq_ENCSR619EZG
Histone_ChIP-seq ENCSR619EZG [biosample_summary="Homo sapiens testis tissue male adult (54 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR619EZG [1.4, 30.6]
n
34,953,723
mean
11.9
sd
6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 349537231.09% 25170
chr1 3305775 1.33% 2325
chr2 2512297 1.04% 1768
chr3 1977132 1.00% 1404
chr4 1566849 0.82% 1167
chr5 1736685 0.96% 1230
chr6 2100538 1.23% 1485
chr7 1751289 1.10% 1308
chr8 1380418 0.95% 1016
chr9 1411629 1.02% 1011
chr10 1489847 1.11% 1036
chr11 1795924 1.33% 1258
chr12 1798524 1.35% 1254
chr13 834747 0.73% 637
chr14 1185427 1.11% 820
chr15 1166502 1.14% 820
chr16 1294049 1.43% 913
chr17 1889753 2.27% 1344
chr18 691050 0.86% 509
chr19 2189979 3.74% 1692
chr20 868412 1.35% 620
chr21 383177 0.82% 293
chr22 735836 1.45% 562
chrX 853746 0.55% 674
chrY 34138 0.06% 24
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 25170 220 12228 1388.71 1238
global segment-length histogram

Files

Filename Size md5
ENCFF305TNC.bed.gz 630.14 KB 23fa478e52d3fbde5847ca5bc93fb4ac
ENCFF305TNC.tabix.bed.gz 283.66 KB db2d56e8c71ca5c1aac437b6853a4aa6
ENCFF305TNC.tabix.bed.gz.tbi 172.93 KB 5d286ac1be09c3452c2d52755805981a
genomic_resource.yaml 1.48 KB 7b91b5233c1ebca2c3aba0f6cdf890d4
statistics/