Resource

Id Histone_ChIP-seq/ENCSR615HXAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR615HXA [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR615HXA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (32 years)
  • date_created: 2015-09-15T20:26:47.093261+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR615HXA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (32 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR615HXA float

Histone_ChIP-seq_ENCSR615HXA
Histone_ChIP-seq ENCSR615HXA [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (32 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR615HXA [1.75, 28.4]
n
24,331,936
mean
7.21
sd
3.48

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 243319360.76% 29631
chr1 2441803 0.98% 2961
chr2 1877759 0.78% 2249
chr3 1365214 0.69% 1691
chr4 721317 0.38% 903
chr5 1156089 0.64% 1345
chr6 1323571 0.77% 1612
chr7 1078939 0.68% 1336
chr8 790401 0.54% 1008
chr9 972674 0.70% 1174
chr10 1102332 0.82% 1384
chr11 1397355 1.03% 1597
chr12 1292340 0.97% 1563
chr13 492773 0.43% 600
chr14 962223 0.90% 1146
chr15 785182 0.77% 962
chr16 978905 1.08% 1194
chr17 1584321 1.90% 1883
chr18 361186 0.45% 434
chr19 1503548 2.57% 1815
chr20 695987 1.08% 895
chr21 299053 0.64% 369
chr22 678628 1.34% 803
chrX 450416 0.29% 679
chrY 19920 0.03% 28
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 29631 190 11906 821.16 635
global segment-length histogram

Files

Filename Size md5
ENCFF168CSQ.bed.gz 608.8 KB 9d6f2e70df14e8e2ec24c86967f62b50
ENCFF168CSQ.tabix.bed.gz 302.82 KB 2da55cdd091b2e77f55c2ed9d99a3864
ENCFF168CSQ.tabix.bed.gz.tbi 134.63 KB dd2bf4cb187152dc8cef9344d99f8808
genomic_resource.yaml 1.55 KB 1bf38bdf878d080d206916cf8c32a261
statistics/