Resource

Id Histone_ChIP-seq/ENCSR614JFDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR614JFD [biosample_summary="Homo sapiens right lobe of liver tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR614JFD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female adult (53 years)
  • date_created: 2017-01-24T04:37:51.463712+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR614JFD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR614JFD float

Histone_ChIP-seq_ENCSR614JFD
Histone_ChIP-seq ENCSR614JFD [biosample_summary="Homo sapiens right lobe of liver tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR614JFD [1.4, 8.32]
n
729,818
mean
3.85
sd
0.825

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 7298180.02% 2668
chr1 32732 0.01% 138
chr2 22348 0.01% 108
chr3 21041 0.01% 93
chr4 47374 0.02% 166
chr4_GL000008v2_random 1879 0.90% 5
chr5 34396 0.02% 146
chr6 11784 0.01% 59
chr7 27840 0.02% 117
chr8 17787 0.01% 77
chr9 18290 0.01% 75
chr10 26594 0.02% 98
chr11 15981 0.01% 65
chr12 44726 0.03% 151
chr13 9088 0.01% 46
chr14 5158 <0.01% 28
chr14_GL000225v1_random 218 0.10% 1
chr15 8800 0.01% 35
chr16 24275 0.03% 73
chr17 8564 0.01% 32
chr17_KI270729v1_random 3789 1.35% 10
chr17_KI270730v1_random 332 0.29% 2
chr18 6152 0.01% 30
chr19 294383 0.50% 928
chr20 12562 0.02% 38
chr21 6699 0.01% 26
chr22 1922 <0.01% 10
chr22_KI270732v1_random 155 0.37% 1
chr22_KI270733v1_random 159 0.09% 1
chr22_KI270736v1_random 1007 0.55% 3
chr22_KI270738v1_random 575 0.58% 2
chrUn_GL000216v2 3353 1.90% 10
chrUn_GL000224v1 749 0.42% 2
chrUn_KI270336v1 128 12.48% 1
chrUn_KI270438v1 1688 1.50% 7
chrUn_KI270442v1 2369 0.60% 10
chrUn_KI270448v1 138 1.73% 1
chrUn_KI270519v1 302 0.22% 1
chrUn_KI270589v1 616 1.39% 2
chrUn_KI270746v1 202 0.30% 1
chrX 12880 0.01% 66
chrY 783 <0.01% 3
3325 contigs with no values (126641232 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 2668 125 2254 273.54 221
global segment-length histogram

Files

Filename Size md5
ENCFF518XCB.bed.gz 48.95 KB f35acbf2e4d46075435601fb67e9e906
ENCFF518XCB.tabix.bed.gz 26.39 KB 699e446953a75a4e7f8bf5d9e4ef0064
ENCFF518XCB.tabix.bed.gz.tbi 20.8 KB c571a42c0e9a146ed4fff17455a9a253
genomic_resource.yaml 1.53 KB 57e1a7456015b4bab477902b042242c8
statistics/