Resource

Id Histone_ChIP-seq/ENCSR611YUJcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR611YUJ [biosample_summary="Homo sapiens tibial nerve tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR611YUJ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001323/
  • biosample_summary: Homo sapiens tibial nerve tissue female adult (53 years)
  • date_created: 2017-01-24T04:37:28.761319+00:00
  • date_released: 2017-01-27
  • doi: 10.17989/ENCSR611YUJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR611YUJ float

Histone_ChIP-seq_ENCSR611YUJ
Histone_ChIP-seq ENCSR611YUJ [biosample_summary="Homo sapiens tibial nerve tissue female adult (53 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR611YUJ [1.25, 16.4]
n
47,068,821
mean
5.44
sd
2.61

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 470688211.46% 40354
chr1 4804848 1.93% 4052
chr2 2788067 1.15% 2168
chr3 1384401 0.70% 1157
chr4 1312245 0.69% 919
chr5 1713070 0.94% 1261
chr6 2560614 1.50% 1899
chr7 2159934 1.36% 1571
chr8 1522713 1.05% 1218
chr9 2035961 1.47% 1587
chr10 2044355 1.53% 1547
chr11 2247744 1.66% 2006
chr12 1762064 1.32% 1500
chr13 812627 0.71% 601
chr14 1309677 1.22% 985
chr15 1324180 1.30% 1118
chr16 1760328 1.95% 1353
chr17 3381282 4.06% 2589
chr18 541830 0.67% 446
chr19 3063278 5.23% 2177
chr20 2095306 3.25% 1679
chr21 484212 1.04% 423
chr22 1186440 2.33% 1158
chrX 4772557 3.06% 6939
chrY 1088 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 40354 220 66345 1166.4 683
global segment-length histogram

Files

Filename Size md5
ENCFF725ZHU.bed.gz 768.57 KB d2e8ce01381bb6cf865d00a062591b71
ENCFF725ZHU.tabix.bed.gz 394.6 KB 093cb1d3b2aa2a5b11a054d8a4b62f34
ENCFF725ZHU.tabix.bed.gz.tbi 117.8 KB 7014541983550087d4b0dc8fbdb96bc6
genomic_resource.yaml 1.51 KB 7b7120feac3da2187715cdbe361687c7
statistics/