Resource

Id Histone_ChIP-seq/ENCSR608FDQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR608FDQ [biosample_summary="Homo sapiens spleen tissue male child (3 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR608FDQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue male child (3 years)
  • date_created: 2015-10-01T07:16:00.375105+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR608FDQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male child (3 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR608FDQ float

Histone_ChIP-seq_ENCSR608FDQ

Histone_ChIP-seq ENCSR608FDQ [biosample_summary="Homo sapiens spleen tissue male child (3 years)" and target="H3K27me3"]
HISTOGRAM FOR Histone_ChIP-seq_ENCSR608FDQ [1.76, 6.18]
n
307,730
mean
4.09
sd
0.675

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 3077300.01% 769
chr1 21585 0.01% 61
chr2 18837 0.01% 43
chr3 13337 0.01% 33
chr4 18046 0.01% 41
chr5 18091 0.01% 47
chr6 12887 0.01% 34
chr7 14791 0.01% 39
chr8 16820 0.01% 41
chr9 13101 0.01% 35
chr10 21657 0.02% 52
chr11 12621 0.01% 31
chr12 15213 0.01% 42
chr13 13723 0.01% 35
chr14 10095 0.01% 25
chr15 10470 0.01% 27
chr16 16352 0.02% 41
chr17 7023 0.01% 19
chr18 9598 0.01% 19
chr19 13132 0.02% 36
chr20 18853 0.03% 44
chr21 2547 0.01% 4
chr22 5437 0.01% 13
chrX 3514 <0.01% 7
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 769 210 1741 400.17 351
global segment-length histogram

Files

Filename Size md5
ENCFF718WPG.bed.gz 14.84 KB 0e84fae05e75a94757ef8dd3912523ba
ENCFF718WPG.tabix.bed.gz 8.27 KB ac712ac990c49698edd0d68fe9294b99
ENCFF718WPG.tabix.bed.gz.tbi 11.38 KB 68c7cdd27363388654d6b890685ccaaf
genomic_resource.yaml 1.96 KB b4196583c3ab0e8e4cc57f92cc4918a4
statistics/