Resource

Id Histone_ChIP-seq/ENCSR607IHYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR607IHY [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR607IHY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with Alzheimer's disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2022-05-11T01:53:44.250361+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR607IHY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with Alzheimer's disease
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR607IHY float

Histone_ChIP-seq_ENCSR607IHY
Histone_ChIP-seq ENCSR607IHY [biosample_summary="Homo sapiens with Alzheimer''s disease; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR607IHY [1.71, 58.5]
n
156,810,771
mean
11.3
sd
8.56

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1568107714.87% 100970
chr1 15696512 6.30% 9771
chr2 11366829 4.69% 7562
chr3 9417374 4.75% 6195
chr4 6175419 3.25% 4185
chr5 8225200 4.53% 5516
chr6 7883837 4.62% 5269
chr7 7428468 4.66% 5220
chr8 6235717 4.30% 4088
chr9 7633215 5.52% 4662
chr10 7963284 5.95% 4993
chr11 9559647 7.08% 5757
chr12 7825601 5.87% 5111
chr13 3568688 3.12% 2447
chr14 5297513 4.95% 3365
chr15 5451673 5.35% 3492
chr16 5773667 6.39% 3694
chr17 8984112 10.79% 5315
chr18 3002643 3.74% 2137
chr19 6687205 11.41% 4014
chr20 4614922 7.16% 2870
chr21 1602819 3.43% 1084
chr22 4047193 7.96% 2497
chrX 2369233 1.52% 1726
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 100970 200 92987 1553.04 952
global segment-length histogram

Files

Filename Size md5
ENCFF812QHM.bed.gz 2.16 MB daed40158376d9cd83a5995bf21c6999
ENCFF812QHM.tabix.bed.gz 1.02 MB 051d513482af7c098cc3c1e4070f5868
ENCFF812QHM.tabix.bed.gz.tbi 270.84 KB 51275eb1ac3ff82e9ffde04b448a6826
genomic_resource.yaml 1.75 KB 649e6c6199487b6dbfbd7764b074ec8f
statistics/