Resource

Id Histone_ChIP-seq/ENCSR606WJAcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR606WJA [biosample_summary="Homo sapiens chorionic villus tissue male embryo (16 weeks)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR606WJA
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0007106/
  • biosample_summary: Homo sapiens chorionic villus tissue male embryo (16 weeks)
  • date_created: 2017-03-22T16:16:45.926297+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR606WJA
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR606WJA float

Histone_ChIP-seq_ENCSR606WJA
Histone_ChIP-seq ENCSR606WJA [biosample_summary="Homo sapiens chorionic villus tissue male embryo (16 weeks)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR606WJA [1.51, 62.1]
n
64,910,423
mean
6.75
sd
3.29

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 649104232.02% 81111
chr1 6873102 2.76% 8492
chr1_KI270713v1_random 600 1.47% 2
chr2 4647342 1.92% 5884
chr3 3886009 1.96% 4934
chr4 2188495 1.15% 2927
chr5 3026499 1.67% 4007
chr6 3598254 2.11% 4763
chr7 3286646 2.06% 4277
chr8 2497355 1.72% 3185
chr9 3056562 2.21% 3798
chr10 2933523 2.19% 3644
chr11 3756194 2.78% 4446
chr12 3025283 2.27% 3807
chr13 1140013 1.00% 1616
chr14 2551525 2.38% 3046
chr14_GL000009v2_random 264 0.13% 1
chr15 2209786 2.17% 2734
chr16 2549548 2.82% 2995
chr16_KI270728v1_random 446 0.02% 2
chr17 3424048 4.11% 3890
chr17_GL000205v2_random 7603 4.10% 9
chr18 990429 1.23% 1352
chr19 3497047 5.97% 3927
chr20 2114124 3.28% 2508
chr21 721763 1.55% 947
chr22 1770671 3.48% 1988
chrUn_GL000195v1 1994 1.09% 5
chrUn_GL000219v1 1042 0.58% 2
chrUn_KI270438v1 888 0.79% 2
chrX 1116970 0.72% 1851
chrY 36398 0.06% 70
3335 contigs with no values (126301682 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 81111 175 11671 800.27 588
global segment-length histogram

Files

Filename Size md5
ENCFF967HWJ.bed.gz 1.72 MB 8b370bb61545440e5061087ae5de8651
ENCFF967HWJ.tabix.bed.gz 837.77 KB 7f7f83863062e63dd63ad6479dcb035e
ENCFF967HWJ.tabix.bed.gz.tbi 218.97 KB 820640b46112958064ab1278753219d8
genomic_resource.yaml 1.52 KB 9454e7eb80fe7897ce47175772429bc8
statistics/