Resource

Id Histone_ChIP-seq/ENCSR605OYCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR605OYC [biosample_summary="Homo sapiens peripheral blood mononuclear cell female adult (28 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR605OYC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell female adult (28 years)
  • date_created: 2015-09-15T20:26:54.821812+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR605OYC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (28 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR605OYC float

Histone_ChIP-seq_ENCSR605OYC
Histone_ChIP-seq ENCSR605OYC [biosample_summary="Homo sapiens peripheral blood mononuclear cell female adult (28 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR605OYC [1.95, 26.5]
n
5,750,430
mean
4.67
sd
1.25

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 57504300.18% 12940
chr1 303880 0.12% 716
chr2 342310 0.14% 853
chr3 267479 0.13% 655
chr4 383245 0.20% 900
chr5 363559 0.20% 820
chr6 222973 0.13% 545
chr7 366643 0.23% 864
chr8 249015 0.17% 591
chr9 188262 0.14% 451
chr10 194209 0.15% 468
chr11 190259 0.14% 468
chr12 283775 0.21% 599
chr13 152266 0.13% 375
chr14 141576 0.13% 353
chr15 152284 0.15% 294
chr16 206037 0.23% 461
chr17 113492 0.14% 260
chr18 96623 0.12% 254
chr19 1093270 1.87% 1937
chr20 104000 0.16% 252
chr21 98675 0.21% 236
chr22 88156 0.17% 202
chrX 147935 0.09% 384
chrY 507 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 12940 165 5341 444.39 373
global segment-length histogram

Files

Filename Size md5
ENCFF779SJS.bed.gz 233.39 KB 46ecf3678c77f0c79b1b242aabc787ad
ENCFF779SJS.tabix.bed.gz 125.37 KB 6219e56a086c8ef41394a9460c9b10e2
ENCFF779SJS.tabix.bed.gz.tbi 89.4 KB 8eaca58a0ecfc76588e2b192fe1d3998
genomic_resource.yaml 1.56 KB 40c9741d8c38b30f58573a7f173987b6
statistics/