Resource

Id Histone_ChIP-seq/ENCSR604JDVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR604JDV [biosample_summary="Homo sapiens cingulate gyrus tissue female adult (75 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR604JDV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002967/
  • biosample_summary: Homo sapiens cingulate gyrus tissue female adult (75 years)
  • date_created: 2015-09-15T19:52:25.736239+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR604JDV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (75 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR604JDV float

Histone_ChIP-seq_ENCSR604JDV
Histone_ChIP-seq ENCSR604JDV [biosample_summary="Homo sapiens cingulate gyrus tissue female adult (75 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR604JDV [2.01, 74.2]
n
65,927,786
mean
9.79
sd
6.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 659277862.05% 77207
chr1 6898773 2.77% 7831
chr2 4678522 1.93% 5643
chr3 3824109 1.93% 4563
chr4 2377255 1.25% 2977
chr5 3287496 1.81% 3848
chr6 3323143 1.95% 3901
chr7 2788145 1.75% 3540
chr8 2508716 1.73% 3039
chr9 3287959 2.38% 3716
chr10 3481597 2.60% 3899
chr11 4187805 3.10% 4640
chr12 3174511 2.38% 3783
chr13 1422885 1.24% 1745
chr14 2338127 2.18% 2593
chr15 2232448 2.19% 2683
chr16 2411145 2.67% 2831
chr17 4006768 4.81% 4464
chr18 1247288 1.55% 1541
chr19 3017790 5.15% 3504
chr20 1959983 3.04% 2286
chr21 670580 1.44% 803
chr22 1814336 3.57% 2048
chrX 986902 0.63% 1328
chrY 1503 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77207 205 15800 853.91 599
global segment-length histogram

Files

Filename Size md5
ENCFF100WAF.bed.gz 1.56 MB ad82a0979f2d39516f5b0e8f64b511b5
ENCFF100WAF.tabix.bed.gz 773.73 KB 31db1cdd9c8a964c09d400ddecd79f92
ENCFF100WAF.tabix.bed.gz.tbi 236.92 KB 34fcbd4ad23e5acdfbeec0a35ec02741
genomic_resource.yaml 2.01 KB e31ba91a4504610687c2236d026f4bc4
statistics/