Resource

Id Histone_ChIP-seq/ENCSR600TOWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR600TOW [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (37 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR600TOW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004550/
  • biosample_summary: Homo sapiens gastroesophageal sphincter tissue male adult (37 years)
  • date_created: 2019-04-27T23:14:34.420666+00:00
  • date_released: 2019-08-01
  • doi: 10.17989/ENCSR600TOW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR600TOW float

Histone_ChIP-seq_ENCSR600TOW
Histone_ChIP-seq ENCSR600TOW [biosample_summary="Homo sapiens gastroesophageal sphincter tissue male adult (37 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR600TOW [1.63, 67.8]
n
145,582,945
mean
18.5
sd
15.7

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1455829454.52% 72533
chr1 14706464 5.91% 6957
chr1_KI270713v1_random 1393 3.42% 3
chr2 11316636 4.67% 5740
chr3 9977226 5.03% 4941
chr4 6128335 3.22% 3138
chr5 6800196 3.75% 3609
chr6 7167867 4.20% 3892
chr7 6715325 4.21% 3496
chr8 5669785 3.91% 3063
chr9 6922519 5.00% 3321
chr10 8419987 6.29% 4034
chr11 7607736 5.63% 3607
chr12 7752907 5.82% 3788
chr13 3325919 2.91% 1726
chr14 5109821 4.77% 2386
chr15 5157941 5.06% 2576
chr16 4877806 5.40% 2450
chr17 7678382 9.22% 3590
chr18 2498400 3.11% 1435
chr19 5464620 9.32% 2464
chr20 3964916 6.15% 1945
chr21 1499745 3.21% 844
chr22 3508716 6.90% 1607
chrUn_GL000195v1 2942 1.61% 2
chrUn_GL000219v1 2908 1.62% 2
chrUn_GL000220v1 489 0.30% 2
chrX 3242962 2.08% 1877
chrY 61002 0.11% 38
3338 contigs with no values (128512444 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 72533 220 179709 2007.13 1250
global segment-length histogram

Files

Filename Size md5
ENCFF133RJS.bed.gz 1.76 MB d0be4320621b41618d235fbbecf0d190
ENCFF133RJS.tabix.bed.gz 798.13 KB 1a7b837e46f05495b6a9f04f54a8fca7
ENCFF133RJS.tabix.bed.gz.tbi 236.28 KB 509fa1c1bbeab9464e3bf8b1dd233520
genomic_resource.yaml 1.55 KB de61f862b099aa52aa33eef66b00d4ad
statistics/