Resource

Id Histone_ChIP-seq/ENCSR597XRKcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR597XRK [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR597XRK
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 48 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:10.307597+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR597XRK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 48 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR597XRK float

Histone_ChIP-seq_ENCSR597XRK
Histone_ChIP-seq ENCSR597XRK [biosample_summary="Homo sapiens BLaER1 48 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR597XRK [1.27, 52.5]
n
95,826,582
mean
9.04
sd
8.41

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 958265822.98% 85361
chr1 3165382 1.27% 2454
chr1_KI270706v1_random 250 0.14% 1
chr1_KI270709v1_random 2180 3.26% 5
chr1_KI270712v1_random 21327 12.11% 27
chr1_KI270713v1_random 9132 22.41% 5
chr1_KI270714v1_random 7680 18.41% 10
chr2 2316303 0.96% 1720
chr3 1269392 0.64% 979
chr3_GL000221v1_random 276 0.18% 1
chr4 959529 0.50% 754
chr5 1445827 0.80% 1073
chr5_GL000208v1_random 279 0.30% 1
chr6 1578394 0.92% 1111
chr7 1470060 0.92% 1084
chr8 1623117 1.12% 1418
chr9 1313378 0.95% 1029
chr9_KI270717v1_random 710 1.77% 2
chr10 1582660 1.18% 1245
chr11 1730077 1.28% 1228
chr12 1552918 1.17% 965
chr13 666012 0.58% 464
chr14 822611 0.77% 590
chr14_GL000194v1_random 565 0.30% 2
chr14_GL000225v1_random 2005 0.95% 6
chr15 1094812 1.07% 836
chr16 1288920 1.43% 956
chr16_KI270728v1_random 716 0.04% 2
chr17 2194485 2.64% 1557
chr17_KI270729v1_random 1202 0.43% 3
chr18 409347 0.51% 367
chr19 1407272 2.40% 1011
chr20 1003851 1.56% 757
chr21 368054 0.79% 310
chr22 874847 1.72% 670
chr22_KI270733v1_random 5342 2.97% 8
chr22_KI270736v1_random 282 0.16% 1
chrUn_GL000216v2 615 0.35% 2
chrUn_GL000220v1 2876 1.78% 4
chrUn_GL000224v1 1675 0.93% 5
chrUn_KI270438v1 5117 4.55% 5
chrUn_KI270442v1 508 0.13% 2
chrUn_KI270744v1 5159 3.06% 9
chrUn_KI270754v1 262 0.65% 1
chrX 65619643 42.05% 62677
chrY 1533 <0.01% 4
3321 contigs with no values (124139253 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 85361 250 141984 1122.6 581
global segment-length histogram

Files

Filename Size md5
ENCFF074WIC.bed.gz 1.58 MB fccf300b969ce0cd21e74791135a8a24
ENCFF074WIC.tabix.bed.gz 807.09 KB 2197c0cf805bf02860e12349ca7a2f74
ENCFF074WIC.tabix.bed.gz.tbi 109.13 KB e4b1308797685db08f7495fae3554b28
genomic_resource.yaml 3.12 KB ee15c003ecc49d87a40561a01e4e543e
statistics/