Resource

Id Histone_ChIP-seq/ENCSR597RXTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR597RXT [biosample_summary="Homo sapiens mammary epithelial cell female adult (18 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR597RXT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0002327/
  • biosample_summary: Homo sapiens mammary epithelial cell female adult (18 years)
  • date_created: 2015-09-15T20:26:30.319551+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR597RXT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (18 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR597RXT float

Histone_ChIP-seq_ENCSR597RXT
Histone_ChIP-seq ENCSR597RXT [biosample_summary="Homo sapiens mammary epithelial cell female adult (18 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR597RXT [1.6, 15.5]
n
168,370,647
mean
4.71
sd
1.62

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1683706475.23% 167025
chr1 16734655 6.72% 16229
chr2 15923991 6.57% 14907
chr3 12719219 6.41% 12274
chr4 9842584 5.17% 9460
chr5 10300458 5.67% 9801
chr6 9924865 5.81% 9875
chr7 7920832 4.97% 8177
chr8 7405058 5.10% 7239
chr9 6498018 4.70% 6591
chr10 7652373 5.72% 7571
chr11 8175988 6.05% 7908
chr12 9497582 7.13% 9591
chr13 4386394 3.84% 4292
chr14 5895459 5.51% 5843
chr15 6411303 6.29% 6444
chr16 4579043 5.07% 4943
chr17 6351194 7.63% 6733
chr18 3931407 4.89% 3833
chr19 3830639 6.53% 4138
chr20 4083593 6.34% 4050
chr21 1765743 3.78% 1771
chr22 2201601 4.33% 2520
chrX 2338648 1.50% 2835
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 167025 265 36658 1008.06 709
global segment-length histogram

Files

Filename Size md5
ENCFF623BME.bed.gz 3.6 MB 13934f5f9e09e74a51ec2e6bc6808ef9
ENCFF623BME.tabix.bed.gz 1.69 MB d85a97c5095e02cc6413e00367eb72fd
ENCFF623BME.tabix.bed.gz.tbi 237.21 KB eb09aac4d07b2bf457ad0faecedf2b3f
genomic_resource.yaml 1.53 KB 9c725df12c05a0bf70cf6ef0725488fe
statistics/