Resource

Id Histone_ChIP-seq/ENCSR596PFUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR596PFU [biosample_summary="Homo sapiens body of pancreas tissue male adult (54 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR596PFU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001150/
  • biosample_summary: Homo sapiens body of pancreas tissue male adult (54 years)
  • date_created: 2016-03-18T21:16:11.029371+00:00
  • date_released: 2016-07-28
  • doi: 10.17989/ENCSR596PFU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR596PFU float

Histone_ChIP-seq_ENCSR596PFU
Histone_ChIP-seq ENCSR596PFU [biosample_summary="Homo sapiens body of pancreas tissue male adult (54 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR596PFU [1.54, 85.2]
n
95,208,242
mean
16.1
sd
13.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 952082422.96% 61229
chr1 9981141 4.01% 6183
chr2 6855300 2.83% 4620
chr3 5603338 2.83% 3751
chr4 3734101 1.96% 2610
chr5 4269987 2.35% 2875
chr6 5011427 2.93% 3447
chr7 4515295 2.83% 3045
chr8 3815504 2.63% 2477
chr9 4331004 3.13% 2696
chr10 4902413 3.66% 3180
chr11 5108829 3.78% 3137
chr12 4586388 3.44% 2952
chr13 2085153 1.82% 1442
chr14 3325947 3.11% 2104
chr15 3428929 3.36% 2160
chr16 3822361 4.23% 2373
chr17 5357930 6.44% 3112
chr18 1796702 2.24% 1201
chr19 4375613 7.46% 2543
chr20 2665589 4.14% 1683
chr21 1132502 2.42% 753
chr22 2465324 4.85% 1439
chrM 1610 9.72% 3
chrX 1958779 1.26% 1390
chrY 77076 0.13% 53
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 61229 250 26603 1554.95 1139
global segment-length histogram

Files

Filename Size md5
ENCFF227ZLQ.bed.gz 1.54 MB 2c07739c29338d11d83cb01913cb3b56
ENCFF227ZLQ.tabix.bed.gz 686.42 KB 453d2c7dd94526615858b8611ae22003
ENCFF227ZLQ.tabix.bed.gz.tbi 230.49 KB ddfd6266ebc88b9d19a781d4d14063dc
genomic_resource.yaml 1.51 KB c774fd807ffd8e1ef65f4d944b3a71ac
statistics/