Resource

Id Histone_ChIP-seq/ENCSR595MTVcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR595MTV [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR595MTV
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008952/
  • biosample_summary: Homo sapiens upper lobe of left lung tissue male adult (37 years)
  • date_created: 2018-04-26T17:31:42.334414+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR595MTV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR595MTV float

Histone_ChIP-seq_ENCSR595MTV
Histone_ChIP-seq ENCSR595MTV [biosample_summary="Homo sapiens upper lobe of left lung tissue male adult (37 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR595MTV [1.34, 11]
n
88,901,087
mean
4.15
sd
1.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 889010872.76% 90496
chr1 9176675 3.69% 9122
chr2 6787981 2.80% 7089
chr3 5612910 2.83% 5895
chr4 2875663 1.51% 3291
chr5 4214417 2.32% 4539
chr6 4721109 2.76% 5172
chr7 3968756 2.49% 4313
chr8 3496399 2.41% 3750
chr9 3982009 2.88% 3911
chr10 4524979 3.38% 4605
chr11 5074891 3.76% 4885
chr12 4459096 3.35% 4557
chr13 1768078 1.55% 2066
chr14 3075254 2.87% 3107
chr15 3336034 3.27% 3326
chr16 3667929 4.06% 3513
chr17 5570214 6.69% 5084
chr18 1447583 1.80% 1643
chr19 4384441 7.48% 3927
chr20 2858270 4.44% 2739
chr21 1044198 2.24% 1082
chr22 2492124 4.90% 2367
chrX 360231 0.23% 509
chrY 1846 <0.01% 4
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 90496 180 22309 982.38 748
global segment-length histogram

Files

Filename Size md5
ENCFF459LAT.bed.gz 1.96 MB 0d3258d34ec05c048e01c307b29db361
ENCFF459LAT.tabix.bed.gz 947.47 KB 34e52f06edfedc2f50ae744f6fd9cf37
ENCFF459LAT.tabix.bed.gz.tbi 259.64 KB f8bf1b66ae9f5c1e3be0ad5f563c06a3
genomic_resource.yaml 1.54 KB 394fd73196746cae16ef2e3b413c4c54
statistics/