Resource

Id Histone_ChIP-seq/ENCSR589TCUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR589TCU [biosample_summary="Homo sapiens spleen tissue female adult (53 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR589TCU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002106/
  • biosample_summary: Homo sapiens spleen tissue female adult (53 years)
  • date_created: 2016-10-19T23:17:21.711718+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR589TCU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR589TCU float

Histone_ChIP-seq_ENCSR589TCU
Histone_ChIP-seq ENCSR589TCU [biosample_summary="Homo sapiens spleen tissue female adult (53 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR589TCU [1.55, 36]
n
215,444,797
mean
7.55
sd
3.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2154447976.70% 104512
chr1 20719614 8.32% 10025
chr2 17308174 7.15% 8799
chr3 13725042 6.92% 6978
chr4 9081493 4.77% 4880
chr5 11139253 6.14% 5482
chr6 10713531 6.27% 5680
chr7 10455694 6.56% 5613
chr8 7870098 5.42% 4248
chr9 9091979 6.57% 4368
chr10 9382615 7.01% 4696
chr11 10461387 7.74% 4750
chr12 11605956 8.71% 5351
chr13 4865352 4.25% 2633
chr14 7696314 7.19% 3740
chr15 7883114 7.73% 3766
chr16 9242940 10.23% 3855
chr17 11121622 13.36% 4820
chr18 3808458 4.74% 2049
chr19 11350971 19.36% 4253
chr20 6074686 9.43% 2632
chr21 2543424 5.45% 1095
chr22 5217473 10.27% 2137
chrX 4085607 2.62% 2662
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 104512 220 62618 2061.44 1094
global segment-length histogram

Files

Filename Size md5
ENCFF154ZVX.bed.gz 2.29 MB 989fd554b92040ff94491748e4babe17
ENCFF154ZVX.tabix.bed.gz 1.07 MB b2ab5b0dbe4806119c539c13410813e6
ENCFF154ZVX.tabix.bed.gz.tbi 152.27 KB 18aaf19dc39dc5478abffda0801f0fc8
genomic_resource.yaml 1.49 KB 94370e21e55b403c89fe8a29ee5cb95a
statistics/