Resource

Id Histone_ChIP-seq/ENCSR588WODcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR588WOD [biosample_summary="Homo sapiens endocrine pancreas tissue adult (59 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR588WOD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000016/
  • biosample_summary: Homo sapiens endocrine pancreas tissue adult (59 years)
  • date_created: 2015-09-15T20:27:25.731106+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR588WOD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: adult (59 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR588WOD float

Histone_ChIP-seq_ENCSR588WOD
Histone_ChIP-seq ENCSR588WOD [biosample_summary="Homo sapiens endocrine pancreas tissue adult (59 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR588WOD [2.16, 10.5]
n
3,399,028
mean
4.24
sd
0.916

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 33990280.11% 9558
chr1 197374 0.08% 536
chr2 184222 0.08% 501
chr3 97362 0.05% 286
chr4 120826 0.06% 329
chr5 146312 0.08% 401
chr6 202914 0.12% 535
chr7 129295 0.08% 354
chr8 145450 0.10% 408
chr9 106701 0.08% 302
chr10 133980 0.10% 375
chr11 109324 0.08% 320
chr12 153455 0.12% 415
chr13 73104 0.06% 211
chr14 113982 0.11% 324
chr14_GL000225v1_random 1588 0.75% 5
chr14_KI270723v1_random 200 0.52% 1
chr15 80399 0.08% 240
chr16 171722 0.19% 476
chr17 93340 0.11% 238
chr17_GL000205v2_random 10407 5.61% 24
chr18 52437 0.07% 161
chr19 122756 0.21% 336
chr20 93839 0.15% 268
chr21 40383 0.09% 115
chr22 45720 0.09% 133
chr22_KI270733v1_random 3399 1.89% 8
chrUn_GL000214v1 614 0.45% 2
chrUn_GL000216v2 163 0.09% 1
chrUn_GL000219v1 3234 1.80% 7
chrUn_GL000220v1 284 0.18% 1
chrUn_GL000224v1 4378 2.44% 10
chrUn_KI270742v1 290 0.16% 1
chrUn_KI270744v1 1226 0.73% 4
chrUn_KI270751v1 669 0.44% 2
chrX 757019 0.49% 2227
chrY 660 <0.01% 1
3330 contigs with no values (127121462 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9558 125 1627 355.62 315
global segment-length histogram

Files

Filename Size md5
ENCFF314FJD.bed.gz 154.72 KB b0ffac10f7d03835f023d75b95afc95e
ENCFF314FJD.tabix.bed.gz 86.09 KB 7f7262da29302506e2cd2b7ba348cbb9
ENCFF314FJD.tabix.bed.gz.tbi 70.55 KB 0ea9114034aa2a0ca611a23c4351c57e
genomic_resource.yaml 1.99 KB 73cf4fceae9d74ded3e5f4fb1c2361eb
statistics/