Resource

Id Histone_ChIP-seq/ENCSR585UDEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR585UDE [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (83 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR585UDE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (83 years)
  • date_created: 2021-04-30T04:18:02.823887+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR585UDE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (83 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR585UDE float

Histone_ChIP-seq_ENCSR585UDE
Histone_ChIP-seq ENCSR585UDE [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (83 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR585UDE [1.69, 43.4]
n
45,571,266
mean
17.2
sd
9.02

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 455712661.42% 30154
chr1 4441703 1.78% 2944
chr2 3178902 1.31% 2124
chr3 2730726 1.38% 1737
chr4 1890224 0.99% 1189
chr5 2275043 1.25% 1438
chr6 2681479 1.57% 1711
chr7 2189610 1.37% 1509
chr8 1802455 1.24% 1197
chr9 1881162 1.36% 1281
chr10 1986169 1.48% 1330
chr11 2466437 1.83% 1570
chr12 2376525 1.78% 1518
chr13 1069538 0.94% 714
chr14 1485370 1.39% 962
chr15 1426687 1.40% 960
chr16 1714138 1.90% 1184
chr17 2506669 3.01% 1640
chr18 885992 1.10% 611
chr19 2734562 4.67% 1869
chr20 1150164 1.78% 801
chr21 440739 0.94% 300
chr22 979106 1.93% 686
chrX 1277866 0.82% 879
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 30154 200 15292 1511.28 1206
global segment-length histogram

Files

Filename Size md5
ENCFF859JHN.bed.gz 715.81 KB e34b94c17e868df23dbc0af274e99ef3
ENCFF859JHN.tabix.bed.gz 331.36 KB 824470c2654eb3992e66c989257e223d
ENCFF859JHN.tabix.bed.gz.tbi 176.79 KB 6993ffc60c2710067a2c30c8c66b5d1b
genomic_resource.yaml 1.57 KB f74da6783f35dd12df88ebbc7e1326ef
statistics/