Resource

Id Histone_ChIP-seq/ENCSR585FIPcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR585FIP [biosample_summary="Homo sapiens colonic mucosa tissue female adult (41 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR585FIP
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (41 years)
  • date_created: 2021-04-30T04:18:07.432503+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR585FIP
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR585FIP float

Histone_ChIP-seq_ENCSR585FIP
Histone_ChIP-seq ENCSR585FIP [biosample_summary="Homo sapiens colonic mucosa tissue female adult (41 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR585FIP [1.68, 6.3]
n
13,653,541
mean
3.38
sd
0.632

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 136535410.42% 17730
chr1 1447066 0.58% 1863
chr2 875899 0.36% 1222
chr3 717241 0.36% 962
chr4 405210 0.21% 589
chr5 589593 0.32% 792
chr6 480309 0.28% 657
chr7 523796 0.33% 707
chr8 349206 0.24% 488
chr9 609813 0.44% 755
chr10 551622 0.41% 755
chr11 802844 0.59% 1008
chr12 849274 0.64% 1104
chr13 158487 0.14% 240
chr14 495913 0.46% 666
chr15 527944 0.52% 718
chr16 755029 0.84% 943
chr17 1036824 1.25% 1290
chr18 150366 0.19% 216
chr19 1139217 1.94% 1259
chr20 468873 0.73% 587
chr21 143267 0.31% 202
chr22 496195 0.98% 591
chrX 79553 0.05% 116
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 17730 220 7131 770.08 650
global segment-length histogram

Files

Filename Size md5
ENCFF709PXL.bed.gz 346.56 KB 8d71a2ad84b9c1b7349639411f5910cf
ENCFF709PXL.tabix.bed.gz 181.46 KB 7584e31d599a8d420016af892b7d241b
ENCFF709PXL.tabix.bed.gz.tbi 78.34 KB 15d9f7e7d5ed794ff0e2a645793c6a72
genomic_resource.yaml 1.52 KB 3b8f51745828da6b5b057003b8269d8d
statistics/