Resource

Id Histone_ChIP-seq/ENCSR581UGCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR581UGC [biosample_summary="Homo sapiens endocrine pancreas tissue male adult (46 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR581UGC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000016/
  • biosample_summary: Homo sapiens endocrine pancreas tissue male adult (46 years)
  • date_created: 2015-09-15T19:51:42.275329+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR581UGC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (46 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR581UGC float

Histone_ChIP-seq_ENCSR581UGC
Histone_ChIP-seq ENCSR581UGC [biosample_summary="Homo sapiens endocrine pancreas tissue male adult (46 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR581UGC [2.02, 12.3]
n
5,518,376
mean
4.69
sd
1.09

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 55183760.17% 19024
chr1 416961 0.17% 1405
chr2 410262 0.17% 1397
chr3 222717 0.11% 761
chr4 217936 0.11% 746
chr5 291974 0.16% 971
chr6 336364 0.20% 1087
chr7 259769 0.16% 873
chr8 275699 0.19% 1005
chr9 236823 0.17% 787
chr10 332027 0.25% 1153
chr11 237619 0.18% 849
chr12 276440 0.21% 951
chr13 167112 0.15% 573
chr14 213999 0.20% 752
chr15 205923 0.20% 731
chr16 333787 0.37% 1238
chr17 236592 0.28% 755
chr17_GL000205v2_random 9851 5.31% 23
chr18 145110 0.18% 533
chr19 255286 0.44% 874
chr20 205286 0.32% 736
chr21 87962 0.19% 302
chr22 115578 0.23% 413
chr22_KI270733v1_random 278 0.15% 1
chrUn_GL000195v1 223 0.12% 1
chrUn_GL000219v1 1223 0.68% 4
chrUn_KI270744v1 1315 0.78% 4
chrUn_KI270746v1 180 0.27% 1
chrX 23888 0.02% 97
chrY 192 <0.01% 1
3336 contigs with no values (128114670 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 19024 180 1771 290.07 245
global segment-length histogram

Files

Filename Size md5
ENCFF191TPX.bed.gz 324.4 KB 55c23b2fc10aff66a99f8515d39eb753
ENCFF191TPX.tabix.bed.gz 178.44 KB 2e77a7e56c96ddb99e73eb1fdf355cce
ENCFF191TPX.tabix.bed.gz.tbi 99.62 KB 75a34263b93a73217408dec55c314b61
genomic_resource.yaml 2.02 KB b3380bcf8a5e438ccd5cc01e6b025ee6
statistics/