Resource

Id Histone_ChIP-seq/ENCSR581LZUcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR581LZU [biosample_summary="Homo sapiens OCI-LY3" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR581LZU
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0006710/
  • biosample_summary: Homo sapiens OCI-LY3
  • date_created: 2014-02-20T05:23:43.084953+00:00
  • date_released: 2014-07-11
  • doi: 10.17989/ENCSR581LZU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR581LZU float

Histone_ChIP-seq_ENCSR581LZU
Histone_ChIP-seq ENCSR581LZU [biosample_summary="Homo sapiens OCI-LY3" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR581LZU [1.53, 24]
n
165,390,502
mean
7.47
sd
3.56

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1653905025.14% 152062
chr1 15122197 6.07% 13665
chr2 13815756 5.70% 12764
chr3 12776809 6.44% 11307
chr4 9038511 4.75% 8756
chr5 8300344 4.57% 7783
chr6 10299209 6.03% 9694
chr7 8227629 5.16% 7676
chr8 7541826 5.20% 6691
chr9 6393555 4.62% 5929
chr10 6368770 4.76% 5982
chr11 8785348 6.50% 7744
chr12 8952282 6.72% 8073
chr13 4851491 4.24% 4639
chr14 5577451 5.21% 5111
chr15 5435453 5.33% 4698
chr16 4488110 4.97% 4140
chr17 5896240 7.08% 5595
chr18 4840678 6.02% 4111
chr19 3903840 6.66% 4133
chr20 4440026 6.89% 3806
chr21 1642564 3.52% 1547
chr22 2873372 5.65% 2449
chrX 5440321 3.49% 5399
chrY 378720 0.66% 370
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 152062 180 20211 1087.65 783
global segment-length histogram

Files

Filename Size md5
ENCFF194TKP.bed.gz 3.91 MB 02f8368ab94a41a3abc05463803a02c8
ENCFF194TKP.tabix.bed.gz 1.63 MB 64f35c291a134f9b918f18806d3c132c
ENCFF194TKP.tabix.bed.gz.tbi 420.46 KB e33d1c0a1d8be5567202bb03db01c347
genomic_resource.yaml 1.59 KB 28cfed82c7e3d80917d716212bfda229
statistics/