Resource

Id Histone_ChIP-seq/ENCSR578MTTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR578MTT [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (53 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR578MTT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0004648/
  • biosample_summary: Homo sapiens esophagus muscularis mucosa tissue female adult (53 years)
  • date_created: 2016-10-19T23:16:04.997015+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR578MTT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR578MTT float

Histone_ChIP-seq_ENCSR578MTT
Histone_ChIP-seq ENCSR578MTT [biosample_summary="Homo sapiens esophagus muscularis mucosa tissue female adult (53 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR578MTT [1.28, 6.07]
n
885,132
mean
3.47
sd
0.749

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 8851320.03% 1304
chr1 32830 0.01% 60
chr2 20778 0.01% 43
chr3 25849 0.01% 45
chr4 47255 0.02% 73
chr5 58187 0.03% 80
chr6 15185 0.01% 28
chr7 35217 0.02% 60
chr8 17086 0.01% 26
chr9 39231 0.03% 55
chr10 25334 0.02% 39
chr11 11752 0.01% 26
chr12 57271 0.04% 88
chr13 4931 <0.01% 12
chr14 7638 0.01% 14
chr15 22601 0.02% 37
chr16 39381 0.04% 61
chr17 18417 0.02% 30
chr18 9204 0.01% 18
chr19 369304 0.63% 453
chr20 5983 0.01% 14
chr21 8273 0.02% 12
chr22 2694 0.01% 5
chrX 10349 0.01% 24
chrY 382 <0.01% 1
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1304 215 5721 678.78 524.5
global segment-length histogram

Files

Filename Size md5
ENCFF260ODB.bed.gz 27.76 KB 702e4de30dd46b1040d33e9591f0863b
ENCFF260ODB.tabix.bed.gz 14.06 KB 92550508d2b76307f233870bf2dbeb90
ENCFF260ODB.tabix.bed.gz.tbi 13.17 KB 6d0a37d5c0df07bb7dcf4a2b65e58087
genomic_resource.yaml 1.56 KB bae243e8ed1a659d0c140c032818a4b4
statistics/