Resource

Id Histone_ChIP-seq/ENCSR568CDBcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR568CDB [biosample_summary="Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (81 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR568CDB
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0014455/
  • biosample_summary: Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (81 years)
  • date_created: 2015-09-15T19:52:46.659156+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR568CDB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (81 years) nuclear fraction
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR568CDB float

Histone_ChIP-seq_ENCSR568CDB
Histone_ChIP-seq ENCSR568CDB [biosample_summary="Homo sapiens subcutaneous abdominal adipose tissue tissue nuclear fraction female adult (81 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR568CDB [1.85, 32.1]
n
50,432,869
mean
6.36
sd
2.94

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 504328691.57% 90208
chr1 3188844 1.28% 5822
chr2 3412672 1.41% 6540
chr3 2734363 1.38% 5241
chr4 3103550 1.63% 5866
chr5 3239188 1.78% 5872
chr6 2307107 1.35% 4528
chr7 3169612 1.99% 5577
chr8 2447799 1.69% 4630
chr9 1764154 1.27% 3247
chr10 2153037 1.61% 3939
chr11 2130278 1.58% 3918
chr12 2546381 1.91% 4271
chr13 1395524 1.22% 2800
chr14 1335613 1.25% 2542
chr15 1276967 1.25% 2269
chr16 1829010 2.02% 2995
chr17 968975 1.16% 1623
chr18 1048532 1.30% 2062
chr19 4740025 8.09% 5551
chr20 1043748 1.62% 1896
chr21 655617 1.40% 1226
chr22 629014 1.24% 1114
chrX 3276146 2.10% 6589
chrY 36713 0.06% 90
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 90208 165 40507 559.07 430
global segment-length histogram

Files

Filename Size md5
ENCFF105ALH.bed.gz 1.68 MB 7fcaa76c8ce0ecce309ba7c18856bbc0
ENCFF105ALH.tabix.bed.gz 865.64 KB f2af08e7151865f7dc231aa04d945fab
ENCFF105ALH.tabix.bed.gz.tbi 346.51 KB 9018ffe509c4784a518ddddc512b0634
genomic_resource.yaml 1.67 KB e3ea57bb6ae8cabc1d27c970124ae160
statistics/