Resource

Id Histone_ChIP-seq/ENCSR564RWYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR564RWY [biosample_summary="Homo sapiens colonic mucosa tissue female adult (73 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR564RWY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000317/
  • biosample_summary: Homo sapiens colonic mucosa tissue female adult (73 years)
  • date_created: 2015-09-15T19:51:44.546360+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR564RWY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (73 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR564RWY float

Histone_ChIP-seq_ENCSR564RWY
Histone_ChIP-seq ENCSR564RWY [biosample_summary="Homo sapiens colonic mucosa tissue female adult (73 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR564RWY [1.32, 19.9]
n
19,940,655
mean
6.12
sd
2.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 199406550.62% 46952
chr1 1985393 0.80% 4701
chr2 1304437 0.54% 2850
chr3 687224 0.35% 1634
chr4 691534 0.36% 1481
chr5 900059 0.50% 2077
chr6 838632 0.49% 1918
chr7 903299 0.57% 2061
chr8 740397 0.51% 1785
chr9 957544 0.69% 2131
chr10 983753 0.74% 2272
chr11 1179845 0.87% 2753
chr12 867572 0.65% 1975
chr13 352943 0.31% 796
chr14 566199 0.53% 1340
chr15 566424 0.56% 1376
chr16 797813 0.88% 1795
chr17 1348723 1.62% 3007
chr18 254732 0.32% 678
chr19 1156131 1.97% 2486
chr20 932672 1.45% 2228
chr21 266505 0.57% 679
chr22 640535 1.26% 1534
chrX 1017423 0.65% 3392
chrY 866 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 46952 150 7629 424.7 303
global segment-length histogram

Files

Filename Size md5
ENCFF552DIJ.bed.gz 811.33 KB 6961994ada931e4e70e35f312b448781
ENCFF552DIJ.tabix.bed.gz 430.13 KB e3c9b9a449255c018045bda7808f23a8
ENCFF552DIJ.tabix.bed.gz.tbi 159.89 KB 91321ef1d12bd8ed2cd04a95a14315b3
genomic_resource.yaml 2.01 KB b80a2603f7335d444775e9249688da8e
statistics/