Resource

Id Histone_ChIP-seq/ENCSR561VNLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR561VNL [biosample_summary="Homo sapiens heart left ventricle tissue female adult (56 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR561VNL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002084/
  • biosample_summary: Homo sapiens heart left ventricle tissue female adult (56 years)
  • date_created: 2021-08-25T18:08:00.925052+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR561VNL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (56 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR561VNL float

Histone_ChIP-seq_ENCSR561VNL
Histone_ChIP-seq ENCSR561VNL [biosample_summary="Homo sapiens heart left ventricle tissue female adult (56 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR561VNL [1.69, 67.5]
n
128,219,071
mean
11.2
sd
9.01

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1282190713.99% 86368
chr1 12907776 5.18% 8576
chr2 10259468 4.24% 7089
chr3 8778664 4.43% 5993
chr4 5281515 2.78% 3812
chr5 6805668 3.75% 4615
chr6 7424012 4.35% 5196
chr7 5528524 3.47% 3937
chr8 5307514 3.66% 3823
chr9 5491613 3.97% 3660
chr10 6687401 5.00% 4492
chr11 6470252 4.79% 4232
chr12 7036072 5.28% 4530
chr13 2977475 2.60% 2158
chr14 4402227 4.11% 2787
chr15 4619224 4.53% 3038
chr16 4180139 4.63% 2871
chr17 6727070 8.08% 4061
chr18 2336935 2.91% 1701
chr19 4836277 8.25% 2956
chr20 3581532 5.56% 2314
chr21 1610024 3.45% 1105
chr22 2789443 5.49% 1771
chrX 2180246 1.40% 1651
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 86368 205 37024 1484.57 1007
global segment-length histogram

Files

Filename Size md5
ENCFF104GTG.bed.gz 2.01 MB 7753537f1cc49e836921df8d945a3bda
ENCFF104GTG.tabix.bed.gz 929.33 KB 2a46ec5bd4dc71ae20e3fd8a66e4a1be
ENCFF104GTG.tabix.bed.gz.tbi 255.67 KB dd8688c342f1e22946d37fe544ce4670
genomic_resource.yaml 1.54 KB d56bdb4636c4e20987f2a8eff0bb067e
statistics/