Resource

Id Histone_ChIP-seq/ENCSR558GCOcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR558GCO [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR558GCO
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)
  • date_created: 2021-04-30T04:18:05.158928+00:00
  • date_released: 2021-06-24
  • doi: 10.17989/ENCSR558GCO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (87 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR558GCO float

Histone_ChIP-seq_ENCSR558GCO
Histone_ChIP-seq ENCSR558GCO [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (87 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR558GCO [1.62, 9.34]
n
44,955,409
mean
3.59
sd
1.1

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 449554091.40% 60712
chr1 1230847 0.49% 1460
chr2 1247189 0.51% 1386
chr3 476924 0.24% 612
chr4 772740 0.41% 820
chr5 940055 0.52% 1004
chr6 1356963 0.79% 1378
chr7 936493 0.59% 883
chr8 691539 0.48% 847
chr9 569565 0.41% 620
chr10 991279 0.74% 1134
chr11 514096 0.38% 599
chr12 818527 0.61% 897
chr13 465122 0.41% 578
chr14 779443 0.73% 958
chr15 665630 0.65% 897
chr16 677585 0.75% 918
chr17 1016450 1.22% 1069
chr18 346204 0.43% 446
chr19 695180 1.19% 968
chr20 585142 0.91% 766
chr21 325641 0.70% 447
chr22 224516 0.44% 334
chrX 28628279 18.35% 41691
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 60712 215 30756 740.47 540
global segment-length histogram

Files

Filename Size md5
ENCFF510CIP.bed.gz 1.05 MB 6c5e19a5e91550e6fb49f7760f7c9321
ENCFF510CIP.tabix.bed.gz 575.37 KB 22251662f0a7bebf5dca1cf8f2690cd7
ENCFF510CIP.tabix.bed.gz.tbi 113.15 KB d0f6c23d94131dc0c6a64079070f3b42
genomic_resource.yaml 1.57 KB 48d6a98d7d181e65c656002994f80b64
statistics/