Resource

Id Histone_ChIP-seq/ENCSR558AXIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR558AXI [biosample_summary="Homo sapiens thyroid gland tissue female adult (51 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR558AXI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002046/
  • biosample_summary: Homo sapiens thyroid gland tissue female adult (51 years)
  • date_created: 2017-07-28T10:09:01.974822+00:00
  • date_released: 2017-08-28
  • doi: 10.17989/ENCSR558AXI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (51 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR558AXI float

Histone_ChIP-seq_ENCSR558AXI
Histone_ChIP-seq ENCSR558AXI [biosample_summary="Homo sapiens thyroid gland tissue female adult (51 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR558AXI [1.72, 4.84]
n
507,739
mean
2.99
sd
0.497

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 5077390.02% 951
chr1 22926 0.01% 55
chr2 24741 0.01% 56
chr3 13984 0.01% 32
chr4 43849 0.02% 84
chr5 39044 0.02% 76
chr6 17020 0.01% 40
chr7 24518 0.02% 45
chr8 21347 0.01% 48
chr9 21928 0.02% 41
chr10 15705 0.01% 36
chr11 11835 0.01% 29
chr12 30336 0.02% 48
chr13 14213 0.01% 32
chr14 10564 0.01% 27
chr15 7937 0.01% 18
chr16 15615 0.02% 27
chr17 5928 0.01% 10
chr18 3692 <0.01% 8
chr19 131252 0.22% 167
chr20 5403 0.01% 11
chr21 6986 0.01% 14
chr22 3080 0.01% 7
chrX 15836 0.01% 40
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 951 215 3704 533.9 428
global segment-length histogram

Files

Filename Size md5
ENCFF322HHY.bed.gz 19.84 KB b3f6df51d9340fb3fb9ef568cab06f2b
ENCFF322HHY.tabix.bed.gz 10.19 KB d908d845c785318626d97503488aec4f
ENCFF322HHY.tabix.bed.gz.tbi 12.96 KB 6f23abdfd2309c93b9865c85d58d83fc
genomic_resource.yaml 1.73 KB 53645e4d9807d8b0f4ccb74ffed82a84
statistics/