Resource

Id Histone_ChIP-seq/ENCSR557TNEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR557TNE [biosample_summary="Homo sapiens B cell male adult (37 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR557TNE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000236/
  • biosample_summary: Homo sapiens B cell male adult (37 years)
  • date_created: 2015-09-16T21:42:00.695618+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR557TNE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR557TNE float

Histone_ChIP-seq_ENCSR557TNE
Histone_ChIP-seq ENCSR557TNE [biosample_summary="Homo sapiens B cell male adult (37 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR557TNE [1.81, 24.1]
n
54,316,920
mean
6.04
sd
2.83

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 543169201.69% 88354
chr1 5588950 2.24% 9341
chr2 4240256 1.75% 6937
chr3 2757683 1.39% 4650
chr4 1920226 1.01% 3118
chr5 2767526 1.52% 4443
chr6 3080853 1.80% 4847
chr7 2541148 1.59% 4126
chr8 2193724 1.51% 3706
chr9 2452732 1.77% 3959
chr10 2835531 2.12% 4704
chr11 3060893 2.27% 5075
chr12 2579653 1.94% 4057
chr13 1268911 1.11% 2102
chr14 1721035 1.61% 2946
chr15 1833600 1.80% 3034
chr16 1835418 2.03% 2984
chr17 3327807 4.00% 4926
chr18 1007515 1.25% 1827
chr19 2813282 4.80% 4025
chr20 2036649 3.16% 3487
chr21 607132 1.30% 990
chr22 1397748 2.75% 2182
chrX 439972 0.28% 867
chrY 8676 0.02% 21
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 88354 170 16195 614.76 435
global segment-length histogram

Files

Filename Size md5
ENCFF065LRV.bed.gz 1.54 MB e1558e9eb5f5cd9f7a6b984ffb4e0fae
ENCFF065LRV.tabix.bed.gz 814.45 KB 07b50236062f133fed281c9adb33042e
ENCFF065LRV.tabix.bed.gz.tbi 239.37 KB f9cff6b67078ca4daa12b85c83c86abc
genomic_resource.yaml 2.17 KB d075ff51b58f9dfaedd7adfc8960ac27
statistics/