type: position_score
table:
  filename: ENCFF192ZDF.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: Histone_ChIP-seq_ENCSR555QHZ
  column_index: 3
  type: float
  desc: 'Histone_ChIP-seq ENCSR555QHZ [biosample_summary="Homo sapiens mesenchymal stem cell female adult and female adult (41 years) and female adult (59 years), originated from adipose tissue" and target="H3K36me3"]'
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'Histone_ChIP-seq ENCSR555QHZ [biosample_summary="Homo sapiens mesenchymal stem cell female adult and female adult (41 years) and female adult (59 years), originated from adipose tissue" and target="H3K36me3"]'
  description: '**status**: released


    **biological\_replicates**: Rep 2, Rep 3


    **summary**: female adult (41 years) female adult female adult (59 years)


    **output\_type**: replicated peaks


    **audit\_internal\_action**: Archived analysis {ENCAN903YLV|/analyses/ENCAN903YLV/}
    has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/}


    **audit\_not\_compliant**: Processed redacted alignments file {ENCFF807JAJ|/files/ENCFF807JAJ/}
    processed by ChIP-seq ENCODE3 hg19 pipeline has 29424957 usable fragments. The
    minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments.
    The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/})


    **audit\_not\_compliant**: Processed redacted alignments file {ENCFF938YTI|/files/ENCFF938YTI/}
    processed by ChIP-seq ENCODE3 hg19 pipeline has 29175536 usable fragments. The
    minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting
    H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments.
    The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE
    ChIP-seq data standards|/data-standards/chip-seq/})'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR555QHZ
    status: released
    assay_term_name: ChIP-seq
    simple_biosample_summary: female adult (41 years) female adult female adult (59
      years)
    biosample_summary: Homo sapiens mesenchymal stem cell female adult and female
      adult (41 years) and female adult (59 years), originated from adipose tissue
    replication_type: anisogenic
    biosample_ontology: /biosample-types/primary_cell_CL_0000134/
    perturbed: false
    doi: 10.17989/ENCSR555QHZ
    date_created: '2015-09-15T19:51:06.546334+00:00'
    date_released: '2013-07-31'
    submitter_comment: Experiment 09aaaf9a-4e92-44f8-a22d-bd3a7e42327f merged into
      base. Experiment 62fd0a71-057e-4abf-8c3b-f7235faf28cd merged into base.
    target: H3K36me3