Resource

Id Histone_ChIP-seq/ENCSR554HDTcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR554HDT [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (84 years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR554HDT
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue male adult (84 years)
  • date_created: 2021-08-25T18:07:42.330043+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR554HDT
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (84 years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR554HDT float

Histone_ChIP-seq_ENCSR554HDT
Histone_ChIP-seq ENCSR554HDT [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (84 years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR554HDT [1.7, 21.4]
n
34,912,432
mean
5.11
sd
2.06

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 349124321.09% 41567
chr1 3659259 1.47% 4270
chr2 2451393 1.01% 2917
chr3 2135795 1.08% 2555
chr4 1188053 0.62% 1491
chr5 1831115 1.01% 2152
chr6 1830493 1.07% 2150
chr7 1387387 0.87% 1778
chr8 1296099 0.89% 1639
chr9 1641051 1.19% 1985
chr10 1844831 1.38% 2183
chr11 2197072 1.63% 2552
chr12 1846074 1.39% 2138
chr13 769393 0.67% 924
chr14 1279962 1.20% 1458
chr15 1203358 1.18% 1444
chr16 1228059 1.36% 1543
chr17 2198186 2.64% 2565
chr18 606916 0.76% 726
chr19 1710363 2.92% 2001
chr20 1027874 1.59% 1209
chr21 358788 0.77% 426
chr22 976889 1.92% 1078
chrX 234161 0.15% 375
chrY 9861 0.02% 8
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 41567 190 21383 839.91 632
global segment-length histogram

Files

Filename Size md5
ENCFF169QSG.bed.gz 815.48 KB 053f26aa95c2ab874b30db7ecb94b526
ENCFF169QSG.tabix.bed.gz 413.72 KB c2cccbd3c22a8e13339f5ab2da609f88
ENCFF169QSG.tabix.bed.gz.tbi 166.11 KB fb41948d685fa6bd6c8e989650753120
genomic_resource.yaml 1.56 KB 9fc23f5f7d318c66d69632944754a550
statistics/