Resource

Id Histone_ChIP-seq/ENCSR553XBXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR553XBX [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (39 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR553XBX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000001/
  • biosample_summary: Homo sapiens peripheral blood mononuclear cell male adult (39 years)
  • date_created: 2017-03-22T16:16:53.555731+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR553XBX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (39 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR553XBX float

Histone_ChIP-seq_ENCSR553XBX
Histone_ChIP-seq ENCSR553XBX [biosample_summary="Homo sapiens peripheral blood mononuclear cell male adult (39 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR553XBX [2.06, 9.63]
n
6,841,133
mean
4.44
sd
1.07

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 68411330.21% 14219
chr1 628736 0.25% 1339
chr2 548358 0.23% 1100
chr3 293939 0.15% 633
chr4 345213 0.18% 665
chr5 438953 0.24% 888
chr6 402471 0.24% 822
chr7 363889 0.23% 764
chr8 295405 0.20% 606
chr9 340942 0.25% 687
chr10 371394 0.28% 781
chr11 340662 0.25% 720
chr12 289625 0.22% 618
chr13 178201 0.16% 362
chr14 240785 0.22% 465
chr15 251265 0.25% 528
chr16 233789 0.26% 477
chr17 345503 0.41% 699
chr18 133666 0.17% 285
chr19 336453 0.57% 762
chr20 249596 0.39% 557
chr21 59231 0.13% 125
chr22 138861 0.27% 295
chrX 13014 0.01% 38
chrY 1182 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 14219 210 3371 481.13 383
global segment-length histogram

Files

Filename Size md5
ENCFF636JEP.bed.gz 235.26 KB 793ff767cdd245cf9ad4eae6254f8a7e
ENCFF636JEP.tabix.bed.gz 131.61 KB a8e273f144ccfcd6cbebe29b61a209e5
ENCFF636JEP.tabix.bed.gz.tbi 75.12 KB ed104b1571f65f45ef12d407ee221323
genomic_resource.yaml 2.05 KB 547f0d5d951ae4c9dafe1b8c0b6db22f
statistics/