Resource

Id Histone_ChIP-seq/ENCSR543DAScontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR543DAS [biosample_summary="Homo sapiens tibial artery tissue female adult (53 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR543DAS
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0007610/
  • biosample_summary: Homo sapiens tibial artery tissue female adult (53 years)
  • date_created: 2016-10-22T16:09:25.300159+00:00
  • date_released: 2016-11-03
  • doi: 10.17989/ENCSR543DAS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (53 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR543DAS float

Histone_ChIP-seq_ENCSR543DAS
Histone_ChIP-seq ENCSR543DAS [biosample_summary="Homo sapiens tibial artery tissue female adult (53 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR543DAS [1.92, 5.52]
n
229,428
mean
3.22
sd
0.539

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2294280.01% 1151
chr1 20902 0.01% 96
chr1_KI270713v1_random 709 1.74% 2
chr2 22082 0.01% 109
chr3 8763 <0.01% 51
chr4 6137 <0.01% 38
chr5 7563 <0.01% 44
chr6 11879 0.01% 63
chr7 11343 0.01% 57
chr8 7029 <0.01% 37
chr9 12660 0.01% 60
chr10 8751 0.01% 45
chr11 11151 0.01% 51
chr12 5608 <0.01% 29
chr13 4439 <0.01% 21
chr14 7370 0.01% 39
chr14_KI270722v1_random 183 0.09% 1
chr15 8831 0.01% 43
chr16 10946 0.01% 54
chr17 24818 0.03% 114
chr18 3341 <0.01% 15
chr19 21512 0.04% 101
chr20 4953 0.01% 29
chr21 1534 <0.01% 12
chr22 4191 0.01% 23
chrUn_GL000219v1 165 0.09% 1
chrUn_KI270442v1 154 0.04% 1
chrUn_KI270519v1 141 0.10% 1
chrX 2273 <0.01% 14
3338 contigs with no values (185360320 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 1151 100 936 199.33 167
global segment-length histogram

Files

Filename Size md5
ENCFF837JMI.bed.gz 20.78 KB aefeefaa39fa3039428ecb3b27354616
ENCFF837JMI.tabix.bed.gz 11.73 KB 181335d9ce2ce6990bcaa84542c2aacd
ENCFF837JMI.tabix.bed.gz.tbi 14.24 KB a03c671caa099c6433746178f63c4762
genomic_resource.yaml 1.52 KB 86fa04b07690a29d2bfaa37592357151
statistics/