Resource
| Id | Histone_ChIP-seq/ENCSR542YRH |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | Histone_ChIP-seq ENCSR542YRH [biosample_summary="Homo sapiens MM.1S" and target="H3K79me2"] |
| Description |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN221DMH|/analyses/ENCAN221DMH/} has in progress subobject document {0f4447ce-6b9b-4fd8-8818-bff349172d5e|/documents/0f4447ce-6b9b-4fd8-8818-bff349172d5e/} audit_internal_action: Released analysis {ENCAN221DMH|/analyses/ENCAN221DMH/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR542YRH | float |
Histone_ChIP-seq_ENCSR542YRH |
Histone_ChIP-seq ENCSR542YRH [biosample_summary="Homo sapiens MM.1S" and target="H3K79me2"]
|
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[1.47, 24.8] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 122694536 | 3.81% | 80662 |
| chr1 | 10913499 | 4.38% | 7370 |
| chr2 | 10425108 | 4.30% | 6377 |
| chr3 | 8223687 | 4.15% | 5144 |
| chr4 | 5653121 | 2.97% | 3734 |
| chr5 | 7039304 | 3.88% | 4338 |
| chr6 | 6371071 | 3.73% | 4129 |
| chr7 | 7917866 | 4.97% | 4898 |
| chr8 | 4743674 | 3.27% | 3155 |
| chr9 | 4613442 | 3.33% | 3241 |
| chr10 | 6155028 | 4.60% | 4064 |
| chr11 | 6167597 | 4.57% | 4010 |
| chr12 | 6088683 | 4.57% | 4027 |
| chr13 | 2371688 | 2.07% | 1751 |
| chr14 | 2515967 | 2.35% | 1961 |
| chr15 | 4595032 | 4.51% | 3103 |
| chr16 | 4444101 | 4.92% | 3051 |
| chr17 | 6364046 | 7.64% | 4128 |
| chr18 | 2597065 | 3.23% | 1719 |
| chr19 | 4348409 | 7.42% | 2949 |
| chr20 | 3693913 | 5.73% | 2151 |
| chr21 | 1485187 | 3.18% | 960 |
| chr22 | 3425839 | 6.74% | 2278 |
| chrX | 2541209 | 1.63% | 2124 |
| 3343 contigs with no values (186304500 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 80662 | 193 | 59757 | 1521.09 | 756 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF411MKT.bed.gz | 1.92 MB | 181873a39ffc7588019fee4b43a79dba |
| ENCFF411MKT.tabix.bed.gz | 858.57 KB | c454f49cf10a35408f226ed118325083 |
| ENCFF411MKT.tabix.bed.gz.tbi | 115.82 KB | eff018362a16ee6d1ab787a87a525a9a |
| genomic_resource.yaml | 1.65 KB | fe8f6189ee642c43cd047d2879ab3027 |
| statistics/ |
