Resource

Id Histone_ChIP-seq/ENCSR541TUXcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR541TUX [biosample_summary="Homo sapiens heart right ventricle tissue male adult (54 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR541TUX
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (54 years)
  • date_created: 2022-02-02T13:42:42.880487+00:00
  • date_released: 2022-07-27
  • doi: 10.17989/ENCSR541TUX
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR541TUX float

Histone_ChIP-seq_ENCSR541TUX
Histone_ChIP-seq ENCSR541TUX [biosample_summary="Homo sapiens heart right ventricle tissue male adult (54 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR541TUX [1.53, 16.1]
n
221,803,124
mean
4.81
sd
1.79

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 2218031246.89% 162658
chr1 21822531 8.77% 15559
chr2 18162362 7.50% 13247
chr3 16107065 8.12% 11645
chr4 9430707 4.96% 7430
chr5 12750404 7.02% 9396
chr6 12586796 7.37% 9587
chr7 10731466 6.73% 8330
chr8 9915632 6.83% 7407
chr9 9559214 6.91% 6841
chr10 12377938 9.25% 8764
chr11 11739164 8.69% 8302
chr12 11032340 8.28% 7915
chr13 5752942 5.03% 4357
chr14 7191744 6.72% 5101
chr15 8138013 7.98% 5842
chr16 7056714 7.81% 5251
chr17 10241542 12.30% 7018
chr18 4755583 5.92% 3684
chr19 6478085 11.05% 4839
chr20 6140619 9.53% 4345
chr21 2303598 4.93% 1778
chr22 5135756 10.11% 3464
chrX 2332124 1.49% 2474
chrY 60785 0.11% 82
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 162658 205 43347 1363.62 938
global segment-length histogram

Files

Filename Size md5
ENCFF443SPS.bed.gz 3.59 MB 791ae2b80d6dad364b43850663f2b016
ENCFF443SPS.tabix.bed.gz 1.65 MB d400a30c1e1050d57a632ca99af04f76
ENCFF443SPS.tabix.bed.gz.tbi 340.9 KB b5a0b2366cbcb0bb4196ca0d8170870e
genomic_resource.yaml 1.53 KB 0a4e38623cb0ec9c7f78f8685a694f87
statistics/