Resource

Id Histone_ChIP-seq/ENCSR535XRYcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR535XRY [biosample_summary="Homo sapiens angular gyrus tissue male adult (81 years)" and target="H3K4me3"]
Description
Labels
  • accession: ENCSR535XRY
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002686/
  • biosample_summary: Homo sapiens angular gyrus tissue male adult (81 years)
  • date_created: 2015-09-15T19:52:24.101712+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR535XRY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (81 years)
  • status: released
  • submitter_comment:
  • target: H3K4me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR535XRY float

Histone_ChIP-seq_ENCSR535XRY
Histone_ChIP-seq ENCSR535XRY [biosample_summary="Homo sapiens angular gyrus tissue male adult (81 years)" and target="H3K4me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR535XRY [1.83, 57.7]
n
47,085,137
mean
16.9
sd
10

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 470851371.46% 36388
chr1 4524424 1.82% 3367
chr2 3306771 1.37% 2590
chr3 2898493 1.46% 2209
chr4 2013765 1.06% 1531
chr5 2506541 1.38% 1884
chr6 2855652 1.67% 2167
chr7 2212242 1.39% 1785
chr8 1893319 1.30% 1471
chr9 1906214 1.38% 1495
chr10 2057716 1.54% 1594
chr11 2541945 1.88% 1867
chr12 2526587 1.90% 1871
chr13 1117229 0.98% 904
chr14 1532206 1.43% 1163
chr15 1470853 1.44% 1143
chr16 1677946 1.86% 1351
chr17 2401808 2.88% 1839
chr17_GL000205v2_random 1349 0.73% 1
chr17_KI270730v1_random 564 0.50% 1
chr18 942188 1.17% 769
chr19 2771324 4.73% 2224
chr20 1163507 1.81% 902
chr21 451725 0.97% 385
chr22 963676 1.90% 757
chr22_KI270736v1_random 423 0.23% 1
chrUn_GL000219v1 3331 1.86% 3
chrX 1300509 0.83% 1083
chrY 42830 0.07% 31
3338 contigs with no values (128417825 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 36388 230 11473 1293.97 962
global segment-length histogram

Files

Filename Size md5
ENCFF807VOC.bed.gz 902.67 KB a2f915f57d7b7cb1cd4f0ce3e20cfdea
ENCFF807VOC.tabix.bed.gz 404.43 KB b28c0784e3392057210f74e6bd2ded87
ENCFF807VOC.tabix.bed.gz.tbi 192.11 KB f0416ded9e14076ade61e9ed6e83b8d6
genomic_resource.yaml 1.5 KB 75a62c42d8d1fec2e79596a1dba05c60
statistics/