Resource

Id Histone_ChIP-seq/ENCSR532BDEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR532BDE [biosample_summary="Homo sapiens psoas muscle tissue female adult (41 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR532BDE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0008450/
  • biosample_summary: Homo sapiens psoas muscle tissue female adult (41 years)
  • date_created: 2022-05-11T01:53:54.562512+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR532BDE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR532BDE float

Histone_ChIP-seq_ENCSR532BDE
Histone_ChIP-seq ENCSR532BDE [biosample_summary="Homo sapiens psoas muscle tissue female adult (41 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR532BDE [1.61, 12.7]
n
115,039,990
mean
4.32
sd
1.23

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1150399903.58% 109305
chr1 11762313 4.72% 10770
chr2 9789781 4.04% 9257
chr3 8907160 4.49% 8491
chr4 4781748 2.51% 4647
chr5 6400750 3.53% 6055
chr6 7359106 4.31% 7042
chr7 5454025 3.42% 5468
chr8 4638297 3.20% 4571
chr9 4954670 3.58% 4703
chr10 6808368 5.09% 6378
chr11 5673003 4.20% 5413
chr12 5273572 3.96% 4974
chr13 2397283 2.10% 2317
chr14 3715260 3.47% 3488
chr15 4193112 4.11% 3921
chr16 4014833 4.44% 3759
chr17 5668960 6.81% 5212
chr18 2417322 3.01% 2333
chr19 3172864 5.41% 3043
chr20 3055825 4.74% 2835
chr21 1111107 2.38% 1086
chr22 2695070 5.30% 2418
chrX 795561 0.51% 1124
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 109305 205 23998 1052.47 772
global segment-length histogram

Files

Filename Size md5
ENCFF983WBS.bed.gz 2.27 MB e7d05a7fea4660613fd6ddc135693807
ENCFF983WBS.tabix.bed.gz 1.1 MB 9057ce207e2d8c1c8f954c981a0339d5
ENCFF983WBS.tabix.bed.gz.tbi 255.13 KB aca820f1aad0d250e4cf58839a5e0c12
genomic_resource.yaml 1.51 KB 17e6c73a78c0559f788affec67cc9bca
statistics/