Resource

Id Histone_ChIP-seq/ENCSR526RGEcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR526RGE [biosample_summary="Homo sapiens placental basal plate tissue female embryo (40 weeks)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR526RGE
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0003013/
  • biosample_summary: Homo sapiens placental basal plate tissue female embryo (40 weeks)
  • date_created: 2017-03-22T16:16:58.933803+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR526RGE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (40 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR526RGE float

Histone_ChIP-seq_ENCSR526RGE
Histone_ChIP-seq ENCSR526RGE [biosample_summary="Homo sapiens placental basal plate tissue female embryo (40 weeks)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR526RGE [1.6, 74.9]
n
91,453,515
mean
7.68
sd
3.62

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 914535152.84% 110155
chr1 9980676 4.01% 11555
chr2 6695598 2.76% 8270
chr3 5801679 2.93% 7085
chr4 3094216 1.63% 4109
chr5 4490815 2.47% 5579
chr6 5123759 3.00% 6480
chr7 4779936 3.00% 6021
chr8 3710680 2.56% 4688
chr9 4257822 3.08% 5087
chr10 3976732 2.97% 4859
chr11 5283340 3.91% 5911
chr12 4297568 3.22% 5296
chr13 1683722 1.47% 2417
chr14 3673432 3.43% 4105
chr15 2993493 2.94% 3605
chr16 3441286 3.81% 3892
chr17 4432950 5.32% 4817
chr18 1343957 1.67% 1885
chr19 4591673 7.83% 5149
chr20 2768378 4.30% 3015
chr21 1099747 2.35% 1358
chr22 2455734 4.83% 2503
chrM 263 1.59% 1
chrX 1475843 0.95% 2467
chrY 216 <0.01% 1
3341 contigs with no values (129060516 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 110155 160 24080 830.23 537
global segment-length histogram

Files

Filename Size md5
ENCFF348XRA.bed.gz 2.18 MB b139146f02c0aa01a8c3b66e7956714d
ENCFF348XRA.tabix.bed.gz 1.07 MB 54637c6268afc843a00f40207b48f9e7
ENCFF348XRA.tabix.bed.gz.tbi 218.11 KB 9321f2ee30b0b4a15bdcad297f108a69
genomic_resource.yaml 1.55 KB d3a498e79f531226b0cbfc3ac4ad6d35
statistics/