Resource

Id Histone_ChIP-seq/ENCSR524RIHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR524RIH [biosample_summary="Homo sapiens neutrophil" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR524RIH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000775/
  • biosample_summary: Homo sapiens neutrophil
  • date_created: 2016-11-04T14:33:04.924713+00:00
  • date_released: 2016-11-16
  • doi: 10.17989/ENCSR524RIH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary:
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR524RIH float

Histone_ChIP-seq_ENCSR524RIH
Histone_ChIP-seq ENCSR524RIH [biosample_summary="Homo sapiens neutrophil" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR524RIH [1.19, 10.3]
n
10,623,131
mean
3.07
sd
0.699

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 106231310.33% 18030
chr1 596592 0.24% 1081
chr2 601551 0.25% 1159
chr3 484277 0.24% 942
chr4 641207 0.34% 1168
chr5 662771 0.37% 1218
chr6 440007 0.26% 872
chr7 804674 0.50% 1408
chr8 429968 0.30% 780
chr9 308865 0.22% 552
chr10 440613 0.33% 729
chr11 312616 0.23% 603
chr12 537952 0.40% 899
chr13 299781 0.26% 622
chr14 218524 0.20% 423
chr15 211684 0.21% 387
chr16 291612 0.32% 452
chr17 177994 0.21% 299
chr18 176608 0.22% 333
chr19 2429543 4.14% 3215
chr20 151410 0.23% 275
chr21 251970 0.54% 332
chr22 69737 0.14% 129
chrX 37112 0.02% 73
chrY 46063 0.08% 79
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 18030 190 12024 589.19 453
global segment-length histogram

Files

Filename Size md5
ENCFF873HTM.bed.gz 363.73 KB b9be5c494244914293e4c735e7424fb6
ENCFF873HTM.tabix.bed.gz 183.24 KB ece65229627a29fd9ac0c26f2094cced
ENCFF873HTM.tabix.bed.gz.tbi 99.31 KB f27e58a8e789d4a46c3c67ed7985fa38
genomic_resource.yaml 1.38 KB 6833043f681bf0c7efbe01b649fe066d
statistics/