Resource

Id Histone_ChIP-seq/ENCSR524MPLcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR524MPL [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR524MPL
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-01-28T04:10:51.904150+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR524MPL
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years) with mild cognitive impairment
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR524MPL float

Histone_ChIP-seq_ENCSR524MPL
Histone_ChIP-seq ENCSR524MPL [biosample_summary="Homo sapiens with mild cognitive impairment; dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR524MPL [1.71, 40.4]
n
111,556,405
mean
9.35
sd
6.85

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1115564053.47% 86034
chr1 11137378 4.47% 8309
chr2 8169415 3.37% 6484
chr3 6669205 3.36% 5334
chr4 4764769 2.50% 3815
chr5 5953258 3.28% 4875
chr6 5784589 3.39% 4404
chr7 5241245 3.29% 4337
chr8 4347204 3.00% 3534
chr9 5668847 4.10% 4063
chr10 5937285 4.44% 4350
chr11 6735306 4.99% 4875
chr12 5524202 4.14% 4461
chr13 2697591 2.36% 2131
chr14 3884914 3.63% 2895
chr15 4070160 3.99% 3081
chr16 3836299 4.25% 2946
chr17 6005761 7.21% 4404
chr18 2241313 2.79% 1803
chr19 4403006 7.51% 3338
chr20 3127005 4.85% 2361
chr21 1195532 2.56% 927
chr22 2405201 4.73% 1810
chrX 1756920 1.13% 1497
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 86034 200 79368 1296.65 753
global segment-length histogram

Files

Filename Size md5
ENCFF319KZD.bed.gz 1.84 MB 7057531ec751b19cba064adf65609f38
ENCFF319KZD.tabix.bed.gz 898.41 KB 171d733578989c6e5b1d0206650811d6
ENCFF319KZD.tabix.bed.gz.tbi 246.02 KB 8d2a683f8b4da9cc59cf7db4e76b2789
genomic_resource.yaml 1.77 KB bdc92f8bf9aab0822522211ba5bb999e
statistics/