Resource

Id Histone_ChIP-seq/ENCSR520KVDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR520KVD [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR520KVD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0009834/
  • biosample_summary: Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)
  • date_created: 2021-08-25T18:07:30.345532+00:00
  • date_released: 2021-09-21
  • doi: 10.17989/ENCSR520KVD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (90 or above years)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR520KVD float

Histone_ChIP-seq_ENCSR520KVD
Histone_ChIP-seq ENCSR520KVD [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue female adult (90 or above years)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR520KVD [1.7, 45.9]
n
109,909,014
mean
8.46
sd
5.67

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1099090143.42% 74978
chr1 10869937 4.37% 7223
chr2 8202503 3.39% 5769
chr3 6757877 3.41% 4710
chr4 4712123 2.48% 3276
chr5 6216270 3.42% 4382
chr6 5744937 3.36% 3968
chr7 5142767 3.23% 3715
chr8 4481166 3.09% 3099
chr9 5374267 3.88% 3511
chr10 5749778 4.30% 3733
chr11 6602585 4.89% 4272
chr12 5587617 4.19% 3918
chr13 2684752 2.35% 1869
chr14 3790697 3.54% 2458
chr15 3843209 3.77% 2579
chr16 3604500 3.99% 2511
chr17 5901326 7.09% 3842
chr18 2295366 2.86% 1634
chr19 4125978 7.04% 2802
chr20 3051144 4.73% 2041
chr21 1155238 2.47% 792
chr22 2477108 4.87% 1668
chrX 1537869 0.99% 1206
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 74978 250 68155 1465.88 953
global segment-length histogram

Files

Filename Size md5
ENCFF721ZGP.bed.gz 1.65 MB 08d1975e97db50c737d0c86d66f78659
ENCFF721ZGP.tabix.bed.gz 790.65 KB 68139c672ce2073c79b7186c807a8c02
ENCFF721ZGP.tabix.bed.gz.tbi 238.05 KB 7c9a9e16da8b80a67f9a26f7e785a251
genomic_resource.yaml 1.61 KB 52feb7eb3a254605f63e1121133a0b93
statistics/