Resource

Id Histone_ChIP-seq/ENCSR512GFQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR512GFQ [biosample_summary="Homo sapiens placenta tissue embryo (16 weeks)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR512GFQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue embryo (16 weeks)
  • date_created: 2017-03-22T16:16:56.251240+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR512GFQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (16 weeks)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR512GFQ float

Histone_ChIP-seq_ENCSR512GFQ
Histone_ChIP-seq ENCSR512GFQ [biosample_summary="Homo sapiens placenta tissue embryo (16 weeks)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR512GFQ [1.6, 12.1]
n
30,705,935
mean
4.49
sd
1.33

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 307059350.95% 45182
chr1 3026828 1.22% 4652
chr2 2009600 0.83% 3035
chr3 920577 0.46% 1523
chr4 1194964 0.63% 1594
chr5 1432627 0.79% 2109
chr6 1397245 0.82% 2115
chr7 1605447 1.01% 2223
chr8 1011288 0.70% 1574
chr9 1615894 1.17% 2174
chr10 1821020 1.36% 2669
chr11 2100674 1.56% 3206
chr12 1385955 1.04% 1942
chr13 680215 0.59% 977
chr14 860170 0.80% 1292
chr15 767445 0.75% 1205
chr16 1503384 1.66% 2082
chr17 1773948 2.13% 2600
chr18 490776 0.61% 778
chr19 1884556 3.21% 2710
chr20 1504995 2.34% 2120
chr21 521424 1.12% 768
chr22 1024238 2.02% 1532
chrX 172665 0.11% 302
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 45182 190 10185 679.61 518
global segment-length histogram

Files

Filename Size md5
ENCFF226TBV.bed.gz 922.7 KB 71c96db88e623b43628aa387f3921243
ENCFF226TBV.tabix.bed.gz 458.49 KB 71cba79fb48e15cbdd512f1e54026f39
ENCFF226TBV.tabix.bed.gz.tbi 132.65 KB d1794335e2b8bac3e1aaae1e5180caf6
genomic_resource.yaml 1.96 KB dba0045a721cde5bb463e56ea29f6508
statistics/