Resource

Id Histone_ChIP-seq/ENCSR511ICHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR511ICH [biosample_summary="Homo sapiens right lobe of liver tissue female adult (47 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR511ICH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue female adult (47 years)
  • date_created: 2022-05-11T01:54:39.297821+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR511ICH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (47 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR511ICH float

Histone_ChIP-seq_ENCSR511ICH
Histone_ChIP-seq ENCSR511ICH [biosample_summary="Homo sapiens right lobe of liver tissue female adult (47 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR511ICH [1.58, 6.18]
n
2,572,682
mean
3.24
sd
0.644

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 25726820.08% 3346
chr1 121134 0.05% 195
chr2 117240 0.05% 192
chr3 85447 0.04% 141
chr4 147262 0.08% 187
chr5 126886 0.07% 181
chr6 53239 0.03% 89
chr7 135972 0.09% 183
chr8 88574 0.06% 131
chr9 98239 0.07% 130
chr10 84580 0.06% 126
chr11 45418 0.03% 75
chr12 153607 0.12% 184
chr13 35463 0.03% 69
chr14 25973 0.02% 49
chr15 44246 0.04% 68
chr16 100221 0.11% 115
chr17 40448 0.05% 51
chr18 38116 0.05% 53
chr19 931289 1.59% 959
chr20 20008 0.03% 31
chr21 13584 0.03% 25
chr22 6954 0.01% 12
chrX 58782 0.04% 100
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3346 225 6713 768.88 602
global segment-length histogram

Files

Filename Size md5
ENCFF069MMP.bed.gz 69.71 KB f8bc1edda9a70c6922e4c4cda08a61d5
ENCFF069MMP.tabix.bed.gz 35.99 KB 47645d8ba10a44c25a393ca3e4c49ef3
ENCFF069MMP.tabix.bed.gz.tbi 25.52 KB 47ca6567fe95f53149b696a0ebe809f3
genomic_resource.yaml 1.53 KB dd3de454015d153dc67925f3aacb9570
statistics/