Resource

Id Histone_ChIP-seq/ENCSR509SNHcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR509SNH [biosample_summary="Homo sapiens ovary tissue female adult (41 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR509SNH
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000992/
  • biosample_summary: Homo sapiens ovary tissue female adult (41 years)
  • date_created: 2022-05-11T01:53:56.798710+00:00
  • date_released: 2022-06-09
  • doi: 10.17989/ENCSR509SNH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR509SNH float

Histone_ChIP-seq_ENCSR509SNH
Histone_ChIP-seq ENCSR509SNH [biosample_summary="Homo sapiens ovary tissue female adult (41 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR509SNH [1.44, 4.97]
n
1,056,060
mean
3.07
sd
0.45

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 10560600.03% 3225
chr1 85837 0.03% 256
chr2 85269 0.04% 268
chr3 62903 0.03% 215
chr4 81909 0.04% 271
chr5 59221 0.03% 192
chr6 51386 0.03% 181
chr7 72243 0.05% 215
chr8 51491 0.04% 158
chr9 48671 0.04% 133
chr10 42635 0.03% 121
chr11 39185 0.03% 124
chr12 46887 0.04% 134
chr13 53238 0.05% 175
chr14 29172 0.03% 88
chr15 21485 0.02% 57
chr16 25436 0.03% 69
chr17 46622 0.06% 110
chr18 19132 0.02% 68
chr19 51866 0.09% 127
chr20 16777 0.03% 43
chr21 15849 0.03% 52
chr22 8278 0.02% 22
chrX 40568 0.03% 146
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 3225 150 1772 327.46 282
global segment-length histogram

Files

Filename Size md5
ENCFF767BVL.bed.gz 60.2 KB 60401c9cfca539e51ef557b771c29be7
ENCFF767BVL.tabix.bed.gz 32.61 KB 29c0f0bbba24fcf873dd323ab0bfb4d8
ENCFF767BVL.tabix.bed.gz.tbi 33.6 KB 6b7692191403cf0307b321d52e51b17e
genomic_resource.yaml 1.49 KB 8606f9b14b7b0e1ac3c805b3492a7070
statistics/