Resource

Id Histone_ChIP-seq/ENCSR506IRDcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR506IRD [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
Description
Labels
  • accession: ENCSR506IRD
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:50:47.145183+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR506IRD
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 6 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K9ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR506IRD float

Histone_ChIP-seq_ENCSR506IRD
Histone_ChIP-seq ENCSR506IRD [biosample_summary="Homo sapiens BLaER1 6 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K9ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR506IRD [1.24, 88.7]
n
102,999,316
mean
15
sd
16.5

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1029993163.20% 122356
chr1 10031785 4.03% 12047
chr1_KI270713v1_random 2392 5.87% 5
chr2 6607425 2.73% 7952
chr3 4851715 2.45% 5749
chr3_GL000221v1_random 595 0.38% 1
chr4 3000470 1.58% 3469
chr5 4291784 2.36% 4804
chr6 4518568 2.65% 4997
chr7 4925761 3.09% 6088
chr8 4251205 2.93% 5139
chr9 4746540 3.43% 5642
chr9_KI270719v1_random 399 0.23% 1
chr10 4479441 3.35% 5528
chr11 5512679 4.08% 6462
chr11_KI270721v1_random 873 0.87% 2
chr12 4938469 3.71% 5784
chr13 1714669 1.50% 1953
chr14 3480985 3.25% 3987
chr14_GL000009v2_random 473 0.23% 1
chr14_GL000194v1_random 1067 0.56% 2
chr14_GL000225v1_random 250 0.12% 1
chr14_KI270723v1_random 815 2.14% 1
chr14_KI270724v1_random 715 1.81% 2
chr14_KI270726v1_random 279 0.64% 1
chr15 3187771 3.13% 3873
chr15_KI270727v1_random 417 0.09% 1
chr16 5676346 6.28% 6926
chr16_KI270728v1_random 250 0.01% 1
chr17 7508016 9.02% 8873
chr17_GL000205v2_random 12223 6.59% 13
chr18 1530057 1.90% 1817
chr19 7084603 12.09% 8126
chr20 3486055 5.41% 4418
chr21 1363135 2.92% 1723
chr22 3863311 7.60% 4912
chr22_KI270731v1_random 552 0.37% 2
chr22_KI270733v1_random 2240 1.25% 4
chrUn_GL000195v1 2614 1.43% 4
chrUn_GL000216v2 772 0.44% 2
chrUn_GL000219v1 4857 2.71% 6
chrUn_GL000220v1 1059 0.65% 4
chrUn_KI270438v1 3797 3.37% 5
chrUn_KI270744v1 1532 0.91% 1
chrX 1909157 1.22% 2025
chrY 1198 <0.01% 2
3321 contigs with no values (124059417 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 122356 250 26250 841.8 460
global segment-length histogram

Files

Filename Size md5
ENCFF536XHB.bed.gz 2.43 MB 7b4865a7b4b509b16fadb0d741c27d93
ENCFF536XHB.tabix.bed.gz 1.18 MB b8966c95b5d81f2eb9aaeb50cd7a1823
ENCFF536XHB.tabix.bed.gz.tbi 273.15 KB f6ed88ca6e26737a203a616e536252b0
genomic_resource.yaml 3.11 KB 9c8acf4634869d1d957b930901a41278
statistics/