Resource

Id Histone_ChIP-seq/ENCSR506FPQcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR506FPQ [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR506FPQ
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0030018/
  • biosample_summary: Homo sapiens BLaER1 24 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • date_created: 2022-01-27T21:51:18.009703+00:00
  • date_released: 2022-05-10
  • doi: 10.17989/ENCSR506FPQ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: 24 hours after the sample was treated with 100 nM 17β-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL CSF1
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR506FPQ float

Histone_ChIP-seq_ENCSR506FPQ
Histone_ChIP-seq ENCSR506FPQ [biosample_summary="Homo sapiens BLaER1 24 hours after the sample\ \ was treated with 100 nM 17\u03B2-estradiol, 10 ng/mL Interleukin-3, 10 ng/mL\ \ CSF1" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR506FPQ [1.56, 91.4]
n
120,140,343
mean
19.1
sd
15.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1201403433.73% 61356
chr1 11270329 4.53% 5730
chr2 8717415 3.60% 4459
chr3 6672238 3.36% 3483
chr4 4577047 2.41% 2412
chr5 6094709 3.36% 3038
chr6 6487487 3.80% 3345
chr7 5561450 3.49% 3046
chr8 5128798 3.53% 2685
chr9 4960938 3.58% 2564
chr10 5771468 4.31% 2869
chr11 5742681 4.25% 2936
chr12 6192032 4.65% 3077
chr13 2762949 2.42% 1431
chr14 3846256 3.59% 1951
chr15 3788136 3.71% 1958
chr16 5218701 5.78% 2644
chr17 6950999 8.35% 3311
chr18 2349449 2.92% 1194
chr19 6375275 10.88% 3216
chr20 4020491 6.24% 2010
chr21 1501170 3.21% 785
chr22 3026250 5.96% 1514
chrX 3124075 2.00% 1698
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 61356 248 45296 1958.09 1257
global segment-length histogram

Files

Filename Size md5
ENCFF165QMM.bed.gz 1.67 MB d33667c5fd4b3bef4eaff5fea88d1e78
ENCFF165QMM.tabix.bed.gz 707.01 KB 1ca7d76790632970fbcb0a82ea89f0b9
ENCFF165QMM.tabix.bed.gz.tbi 225.37 KB 2f3dba732038e7d8241bcf84c9fb3018
genomic_resource.yaml 2.32 KB a9204a4b4e12657121789acd54b2675a
statistics/