Resource

Id Histone_ChIP-seq/ENCSR503XFWcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR503XFW [biosample_summary="Homo sapiens stomach tissue male adult (37 years)" and target="H3K9me3"]
Description
Labels
  • accession: ENCSR503XFW
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000945/
  • biosample_summary: Homo sapiens stomach tissue male adult (37 years)
  • date_created: 2019-07-29T21:14:53.798565+00:00
  • date_released: 2019-09-11
  • doi: 10.17989/ENCSR503XFW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (37 years)
  • status: released
  • submitter_comment:
  • target: H3K9me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR503XFW float

Histone_ChIP-seq_ENCSR503XFW
Histone_ChIP-seq ENCSR503XFW [biosample_summary="Homo sapiens stomach tissue male adult (37 years)" and target="H3K9me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR503XFW [1.28, 18.9]
n
110,358,609
mean
4.47
sd
2.11

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1103586093.43% 92191
chr1 6411932 2.58% 5778
chr1_KI270706v1_random 1656 0.95% 4
chr1_KI270707v1_random 436 1.36% 1
chr1_KI270709v1_random 19727 29.50% 23
chr1_KI270712v1_random 2816 1.60% 4
chr2 7701224 3.18% 7308
chr2_KI270716v1_random 8626 5.61% 1
chr3 6657550 3.36% 6244
chr4 7056748 3.71% 6663
chr4_GL000008v2_random 5250 2.50% 2
chr5 8173662 4.50% 7033
chr5_GL000208v1_random 26011 28.06% 18
chr6 5594033 3.28% 5289
chr7 7800320 4.90% 5989
chr8 6041570 4.16% 5363
chr9 3653767 2.64% 3231
chr9_KI270719v1_random 14097 7.97% 18
chr9_KI270720v1_random 5645 14.46% 5
chr10 5194555 3.88% 4108
chr11 5204175 3.85% 4331
chr12 5177175 3.88% 4035
chr13 3581559 3.13% 3634
chr14 3270421 3.06% 3038
chr14_GL000009v2_random 5249 2.60% 11
chr14_GL000194v1_random 6881 3.59% 9
chr14_GL000225v1_random 137332 65.03% 39
chr14_KI270722v1_random 1676 0.86% 2
chr14_KI270723v1_random 6940 18.21% 6
chr14_KI270725v1_random 8940 5.17% 9
chr15 2695992 2.64% 2286
chr16 3361542 3.72% 2697
chr16_KI270728v1_random 4124 0.22% 5
chr17 1817633 2.18% 1451
chr17_GL000205v2_random 48650 26.21% 14
chr17_KI270729v1_random 129102 45.97% 19
chr17_KI270730v1_random 27060 24.04% 6
chr18 2564536 3.19% 2535
chr19 9786439 16.70% 3886
chr20 1935699 3.00% 1745
chr21 1869522 4.00% 1724
chr22 1067428 2.10% 941
chr22_KI270732v1_random 14660 35.29% 14
chr22_KI270733v1_random 13580 7.55% 16
chr22_KI270735v1_random 20725 48.41% 21
chr22_KI270736v1_random 162388 89.26% 25
chr22_KI270737v1_random 1009 0.97% 2
chr22_KI270738v1_random 45182 45.47% 11
chrM 8625 52.06% 4
chrUn_GL000214v1 3511 2.55% 5
chrUn_GL000216v2 33944 19.22% 18
chrUn_GL000218v1 2046 1.27% 4
chrUn_GL000219v1 35438 19.78% 24
chrUn_GL000220v1 826 0.51% 2
chrUn_GL000224v1 32487 18.08% 18
chrUn_KI270320v1 860 19.47% 1
chrUn_KI270333v1 465 17.23% 1
chrUn_KI270429v1 746 54.81% 1
chrUn_KI270435v1 29375 31.59% 22
chrUn_KI270438v1 69436 61.72% 23
chrUn_KI270442v1 235613 60.10% 116
chrUn_KI270448v1 3750 46.92% 3
chrUn_KI270465v1 483 27.23% 1
chrUn_KI270467v1 850 21.68% 1
chrUn_KI270468v1 2636 65.01% 2
chrUn_KI270507v1 4460 83.32% 4
chrUn_KI270508v1 1805 92.52% 2
chrUn_KI270509v1 920 39.69% 1
chrUn_KI270510v1 1877 77.72% 2
chrUn_KI270511v1 4691 57.72% 1
chrUn_KI270512v1 8124 35.81% 6
chrUn_KI270515v1 3838 60.34% 2
chrUn_KI270516v1 1083 83.31% 1
chrUn_KI270517v1 1673 51.43% 1
chrUn_KI270518v1 1316 60.20% 1
chrUn_KI270519v1 69548 50.35% 57
chrUn_KI270522v1 3193 56.27% 1
chrUn_KI270538v1 25955 28.43% 22
chrUn_KI270580v1 1033 66.52% 1
chrUn_KI270583v1 1347 96.21% 1
chrUn_KI270584v1 2823 62.55% 2
chrUn_KI270587v1 1250 42.10% 1
chrUn_KI270588v1 3241 52.63% 4
chrUn_KI270589v1 3724 8.37% 2
chrUn_KI270590v1 3701 79.00% 4
chrUn_KI270591v1 4718 81.40% 2
chrUn_KI270593v1 1387 45.61% 1
chrUn_KI270742v1 5389 2.89% 9
chrUn_KI270743v1 363 0.17% 1
chrUn_KI270744v1 12784 7.59% 13
chrUn_KI270746v1 10857 16.33% 10
chrUn_KI270747v1 2204 1.11% 2
chrUn_KI270749v1 8069 5.08% 8
chrUn_KI270750v1 15850 10.65% 17
chrUn_KI270751v1 14179 9.41% 17
chrUn_KI270753v1 749 1.19% 1
chrUn_KI270754v1 1820 4.53% 5
chrUn_KI270756v1 10799 13.57% 6
chrUn_KI270757v1 17356 24.36% 14
chrX 1772482 1.14% 1718
chrY 537666 0.94% 411
3266 contigs with no values (120299109 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 92191 235 115402 1197.06 830
global segment-length histogram

Files

Filename Size md5
ENCFF844YHY.bed.gz 1.93 MB 0bafc5117c9714d8e45aaa54a488c06e
ENCFF844YHY.tabix.bed.gz 957.26 KB 5377e522207d70d437159cc93ee25c9b
ENCFF844YHY.tabix.bed.gz.tbi 328.5 KB b9163d2dc27ca8d68792cdddec4e709a
genomic_resource.yaml 1.49 KB 9b87d7f8b56d81ea1ce36163271fef67
statistics/