Resource

Id Histone_ChIP-seq/ENCSR499GKRcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR499GKR [biosample_summary="Homo sapiens pancreas tissue female adult (41 years)" and target="H3K27me3"]
Description
Labels
  • accession: ENCSR499GKR
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001264/
  • biosample_summary: Homo sapiens pancreas tissue female adult (41 years)
  • date_created: 2021-01-28T22:01:57.696188+00:00
  • date_released: 2021-05-06
  • doi: 10.17989/ENCSR499GKR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (41 years)
  • status: released
  • submitter_comment:
  • target: H3K27me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR499GKR float

Histone_ChIP-seq_ENCSR499GKR
Histone_ChIP-seq ENCSR499GKR [biosample_summary="Homo sapiens pancreas tissue female adult (41 years)" and target="H3K27me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR499GKR [1.68, 9.64]
n
4,946,200
mean
3.25
sd
0.589

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 49462000.15% 9275
chr1 274935 0.11% 503
chr2 310195 0.13% 532
chr3 159358 0.08% 289
chr4 192128 0.10% 346
chr5 240205 0.13% 420
chr6 355704 0.21% 565
chr7 259808 0.16% 386
chr8 179127 0.12% 337
chr9 162189 0.12% 278
chr10 253386 0.19% 446
chr11 153369 0.11% 301
chr12 187912 0.14% 363
chr13 145579 0.13% 245
chr14 164261 0.15% 272
chr15 125132 0.12% 250
chr16 111023 0.12% 222
chr17 189223 0.23% 331
chr18 84015 0.10% 172
chr19 116592 0.20% 242
chr20 119594 0.19% 246
chr21 50942 0.11% 110
chr22 57129 0.11% 133
chrX 1054394 0.68% 2286
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 9275 225 4980 533.28 434
global segment-length histogram

Files

Filename Size md5
ENCFF663DVO.bed.gz 162.03 KB d79feede61c1b174f72b948cf17f114d
ENCFF663DVO.tabix.bed.gz 88.96 KB e137325d95b8968ebf81770703dd2283
ENCFF663DVO.tabix.bed.gz.tbi 62.52 KB 077839227cfbe0d4127e6c28054e36bd
genomic_resource.yaml 1.5 KB c912bc6bbf1a4696d38e6d82ace3f667
statistics/