Resource

Id Histone_ChIP-seq/ENCSR499FXIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR499FXI [biosample_summary="Homo sapiens prostate gland tissue male adult (54 years)" and target="H3K36me3"]
Description
Labels
  • accession: ENCSR499FXI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002367/
  • biosample_summary: Homo sapiens prostate gland tissue male adult (54 years)
  • date_created: 2017-07-28T10:10:06.946878+00:00
  • date_released: 2017-08-28
  • doi: 10.17989/ENCSR499FXI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:
  • target: H3K36me3

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR499FXI float

Histone_ChIP-seq_ENCSR499FXI
Histone_ChIP-seq ENCSR499FXI [biosample_summary="Homo sapiens prostate gland tissue male adult (54 years)" and target="H3K36me3"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR499FXI [1.71, 6.92]
n
11,709,959
mean
3.51
sd
0.675

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 117099590.36% 12931
chr1 1143014 0.46% 1321
chr2 602694 0.25% 719
chr3 615989 0.31% 692
chr4 229214 0.12% 321
chr5 380823 0.21% 478
chr6 379181 0.22% 464
chr7 486040 0.31% 537
chr8 263480 0.18% 327
chr9 536792 0.39% 593
chr10 358735 0.27% 430
chr11 703796 0.52% 753
chr12 762772 0.57% 828
chr13 92536 0.08% 117
chr14 342318 0.32% 419
chr15 368712 0.36% 423
chr16 808178 0.89% 839
chr17 924483 1.11% 976
chr18 92085 0.11% 122
chr19 1575647 2.69% 1456
chr20 381874 0.59% 426
chr21 126965 0.27% 156
chr22 506210 1.00% 508
chrX 28421 0.02% 26
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 12931 235 8486 905.57 750
global segment-length histogram

Files

Filename Size md5
ENCFF139GKT.bed.gz 257.19 KB a7f81b83dbf1f0a100bd0efac2f31817
ENCFF139GKT.tabix.bed.gz 134.56 KB 7fbb812e4576468353147ffef77854ee
ENCFF139GKT.tabix.bed.gz.tbi 64.07 KB 8f50a8736c7adcb0f149a080f25e6a47
genomic_resource.yaml 1.51 KB 01fa6a0a0c2a906e402a83ac8813cc9a
statistics/