Resource

Id Histone_ChIP-seq/ENCSR498ZRCcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR498ZRC [biosample_summary="Homo sapiens placenta tissue female embryo (113 days)" and target="H3K27ac"]
Description
Labels
  • accession: ENCSR498ZRC
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001987/
  • biosample_summary: Homo sapiens placenta tissue female embryo (113 days)
  • date_created: 2015-09-16T21:42:42.096329+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR498ZRC
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female embryo (113 days)
  • status: released
  • submitter_comment:
  • target: H3K27ac

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR498ZRC float

Histone_ChIP-seq_ENCSR498ZRC
Histone_ChIP-seq ENCSR498ZRC [biosample_summary="Homo sapiens placenta tissue female embryo (113 days)" and target="H3K27ac"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR498ZRC [1.79, 89.6]
n
73,018,166
mean
13.2
sd
10.2

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 730181662.27% 84939
chr1 7572839 3.04% 8516
chr2 5362519 2.21% 6286
chr3 4473763 2.26% 5198
chr4 2688998 1.41% 3369
chr5 3615987 1.99% 4227
chr6 4305087 2.52% 5028
chr7 3711057 2.33% 4440
chr8 3057737 2.11% 3594
chr9 3419720 2.47% 3870
chr10 3349648 2.50% 3968
chr11 4100113 3.04% 4504
chr12 3469284 2.60% 4141
chr13 1415240 1.24% 1796
chr14 2726402 2.55% 2974
chr15 2381214 2.33% 2808
chr16 2581237 2.86% 3041
chr17 3608709 4.33% 4055
chr17_GL000205v2_random 6732 3.63% 7
chr18 1259358 1.57% 1639
chr19 3450645 5.89% 3914
chr20 2205059 3.42% 2428
chr21 848973 1.82% 1041
chr22 1771176 3.49% 1899
chrUn_GL000195v1 2293 1.25% 6
chrUn_GL000219v1 852 0.48% 2
chrX 1633524 1.05% 2188
3340 contigs with no values (185756815 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 84939 185 17370 859.65 564
global segment-length histogram

Files

Filename Size md5
ENCFF684BWJ.bed.gz 1.79 MB d185bb65e3e4e8a2879ce9ee8a7db17c
ENCFF684BWJ.tabix.bed.gz 871.92 KB 0ec63d3ff7d173cfdf194dc110749c17
ENCFF684BWJ.tabix.bed.gz.tbi 225.83 KB 8d8ce1e74d5e8a1ba66949c86f30ecf6
genomic_resource.yaml 1.98 KB ad4837ccb977c78a217b08a5298e7193
statistics/