Resource

Id Histone_ChIP-seq/ENCSR496TBIcontent_copy
Type position_score
Version 0
Summary Histone_ChIP-seq ENCSR496TBI [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)" and target="H3K4me1"]
Description
Labels
  • accession: ENCSR496TBI
  • assay_term_name: ChIP-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue female adult (46 years)
  • date_created: 2020-05-01T02:19:35.272629+00:00
  • date_released: 2020-09-15
  • doi: 10.17989/ENCSR496TBI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (46 years)
  • status: released
  • submitter_comment:
  • target: H3K4me1

Scores (1)

ID Type Default annotation Description Histogram Range Summary
Histone_ChIP-seq_ENCSR496TBI float

Histone_ChIP-seq_ENCSR496TBI
Histone_ChIP-seq ENCSR496TBI [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)" and target="H3K4me1"]
 HISTOGRAM FOR Histone_ChIP-seq_ENCSR496TBI [1.7, 10.6]
n
91,947,815
mean
4
sd
1.17

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 919478152.86% 98125
chr1 9420200 3.78% 9784
chr2 7316120 3.02% 7829
chr3 6450083 3.25% 7016
chr4 3393677 1.78% 4012
chr5 4853670 2.67% 5429
chr6 4834820 2.83% 5591
chr7 4180678 2.62% 4794
chr8 3775551 2.60% 4292
chr9 4105462 2.97% 4170
chr10 5159740 3.86% 5292
chr11 5090353 3.77% 5210
chr12 4710958 3.53% 4849
chr13 2113105 1.85% 2412
chr14 3088549 2.89% 3234
chr15 3411587 3.34% 3595
chr16 3230780 3.58% 3389
chr17 5036295 6.05% 4813
chr18 1674813 2.08% 2008
chr19 3541517 6.04% 3471
chr20 2667027 4.14% 2781
chr21 851573 1.82% 961
chr22 2480068 4.88% 2398
chrX 561189 0.36% 795
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 98125 240 22777 937.05 698
global segment-length histogram

Files

Filename Size md5
ENCFF777RBS.bed.gz 1.91 MB 33624b3f7bf4bf33ab6cb926b66c7729
ENCFF777RBS.tabix.bed.gz 999.68 KB 329cf95774a89c99027d91a6fb6bf474
ENCFF777RBS.tabix.bed.gz.tbi 268.01 KB ef90ba1c27c3e7da44ccac6e6768a128
genomic_resource.yaml 1.76 KB fc7579aad6bdb35253da4dd3a44706cd
statistics/